RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MMP13P45452 471 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 MAXP61244 160 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 CDK3Q00526 305 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 TRAF2Q12933 501 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 CLPPQ16740 277 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 TDRD12Q587J7 1177 aaKnown RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 KIAA1614Q5VZ46 1190 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 Q6ZVL8 140 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 HSD11B1LQ7Z5J1 315 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 C17orf82Q86X59 251 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 SLITRK4Q8IW52 837 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 NIPA2Q8N8Q9 360 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 ZDHHC1Q8WTX9 485 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 MED8Q96G25 268 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 MCCC1Q96RQ3 725 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 FRMD8Q9BZ67 464 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 PCDH18Q9HCL0 1135 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 RCOR3Q9P2K3 495 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 RHPN2P1A8MT19 583 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 EFSO43281 561 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 B4GAT1O43505 415 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 FUCA1P04066 466 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 LIPCP11150 499 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 LHCGRP22888 699 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 DPTQ07507 201 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 BIRC2Q13490 618 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 PHF19Q5T6S3 580 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 TMEM164Q5U3C3 297 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 RAET1GQ6H3X3 334 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 NRROSQ86YC3 692 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 SYN2Q92777 582 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-219ENST00000440240 SEMA4CQ9C0C4 833 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 B3GNT4Q9C0J1 378 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 SUDS3Q9H7L9 328 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-219ENST00000440240 TAAR2Q9P1P5 351 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 SUFUQ9UMX1 484 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 SLC17A4Q9Y2C5 497 aa20.71■□□□□ 0.91
CPNE1-219ENST00000440240 ARHGEF17Q96PE2 2063 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GOLGA6CA6NDK9 693 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GOLGA6BA6NDN3 693 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 NPIPB15A6NHN6 443 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-219ENST00000440240 B8ZZF3 427 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 J3QKU1 62 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GOLGA6DP0CG33 693 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 ITIH1P19827 911 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 CES1P23141 567 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 ALDH4A1P30038 563 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GPR3P46089 330 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GNPDA1P46926 289 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 KRT81Q14533 505 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 TGIF1Q15583 401 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 MAP9Q49MG5 647 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 HGSNATQ68CP4 663 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 TXNRD3NBQ6F5E7 133 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 XKR5Q6UX68 686 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 USP53Q70EK8 1073 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 ZNF438Q7Z4V0 828 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 TECPR1Q7Z6L1 1165 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 TEX26Q8N6G2 289 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 PIH1D2Q8WWB5 315 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 THAP2Q9H0W7 228 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 GOLGA6AQ9NYA3 693 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 PCDHB11Q9Y5F2 797 aa20.7■□□□□ 0.9
CPNE1-219ENST00000440240 A0A1W2PQJ5 194 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 MYO1FO00160 1098 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 ZIC2O95409 532 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-219ENST00000440240 ECEL1O95672 775 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 IVLP07476 585 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 CD82P27701 267 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 GPR1P46091 355 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 MAZP56270 477 aaKnown RBP20.69■□□□□ 0.9
CPNE1-219ENST00000440240 OR1D5P58170 312 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 CTBSQ01459 385 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 ITKQ08881 620 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 NR1D2Q14995 579 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 HADHQ16836 314 aaKnown RBP20.69■□□□□ 0.9
CPNE1-219ENST00000440240 AMZ1Q400G9 498 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 CCDC122Q5T0U0 273 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 TMPRSS9Q7Z410 1059 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 NLRP8Q86W28 1048 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 USP7Q93009 1102 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 SEMA3CQ99985 751 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 POLR1EQ9GZS1 481 aaKnown RBP20.69■□□□□ 0.9
CPNE1-219ENST00000440240 SEMA6CQ9H3T2 930 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 RDH14Q9HBH5 336 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 NT5MQ9NPB1 228 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 HAUS2Q9NVX0 235 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 ANAPC7Q9UJX3 599 aa20.69■□□□□ 0.9
CPNE1-219ENST00000440240 PRAMEF33A0A0G2JMD5 474 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 PRAMEF10O60809 474 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 SERPING1P05155 500 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 CYP1A2P05177 515 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 PYGLP06737 847 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 CTPS1P17812 591 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 IL4RP24394 825 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 AK4P27144 223 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-219ENST00000440240 ADCY8P40145 1251 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 MAPK10P53779 464 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 SLC25A11Q02978 314 aaKnown RBP20.68■□□□□ 0.9
CPNE1-219ENST00000440240 IQCB1Q15051 598 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms