RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MMP2P08253 660 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 BMP2P12643 396 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 CDH2P19022 906 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC5A2P31639 672 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 CD86P42081 329 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ALDH3B2P48448 385 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 RENBPP51606 427 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 STX1BP61266 288 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 HERVK_113P63132 956 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 CYTH1Q15438 398 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 MAPRE1Q15691 268 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 PIK3R6Q5UE93 754 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ZNF598Q86UK7 904 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 UMODL1-AS1Q8N2C9 162 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 PNPLA1Q8N8W4 532 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 DRAXINQ8NBI3 349 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 OR2T34Q8NGX1 318 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 C3orf30Q96M34 536 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 CIB1Q99828 191 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 GPATCH1Q9BRR8 931 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ERVK-6Q9BXR3 956 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ANKRD60Q9BZ19 345 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 FBRSL1Q9HCM7 1045 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 NT5MQ9NPB1 228 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 PNPLA3Q9NST1 481 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 HSFX1Q9UBD0 423 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 DSEQ9UL01 958 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 MYO16Q9Y6X6 1858 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 SCN5AQ14524 2016 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 HTRA2O43464 458 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 NBNO60934 754 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 B3GAT3O94766 335 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 SUPT7LO94864 414 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 MT-CO1P00395 513 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 HSPA8P11142 646 aaKnown RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 ATP6V1B2P21281 511 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 ARSDP51689 593 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 MLLT6P55198 1093 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 USP46P62068 366 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 IHHQ14623 411 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 GPNMBQ14956 572 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 LRRC23Q53EV4 343 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 RETREG3Q86VR2 466 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 NUP93Q8N1F7 819 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 MYO1HQ8N1T3 1032 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 PTERQ96BW5 349 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 C1orf74Q96LT6 269 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 CCT7Q99832 543 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC39A3Q9BRY0 314 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 TMEM79Q9BSE2 394 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 NOL11Q9H8H0 719 aaKnown RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 MARCH4Q9P2E8 410 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 ABCD2Q9UBJ2 740 aa16.39■□□□□ 0.21
CLCNKA-203ENST00000439316 ATP6AP2A0A1C7CYW4 349 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 ATP6AP2O75787 350 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 STAMBPO95630 424 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 TSPAN8P19075 237 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 FDXRP22570 491 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 PCSK6P29122 969 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 NDST2P52849 883 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 MAXP61244 160 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 DSC2Q02487 901 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 PPP4R4Q6NUP7 873 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 ERMP1Q7Z2K6 904 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 LDB1Q86U70 411 aaPredicted RBP16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 PIM3Q86V86 326 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 ZNF683Q8IZ20 524 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 CLYBLQ8N0X4 340 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 PCYOX1LQ8NBM8 494 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 SH3RF2Q8TEC5 729 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 ZUFSPQ96AP4 578 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 TADA1Q96BN2 335 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 HMCESQ96FZ2 354 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 SERPINB11Q96P15 392 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 AKTIPQ9H8T0 292 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 TIMMDC1Q9NPL8 285 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 OLAHQ9NV23 265 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 DUS2Q9NX74 493 aaKnown RBP16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 GMPR2Q9P2T1 348 aaKnown RBP16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 MYRFQ9Y2G1 1151 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 H3BSA7 217 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 J3KR12 359 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 TIPRLO75663 272 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 TNK2Q07912 1038 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC10A7Q0GE19 358 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 MAP7D1Q3KQU3 841 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 NHSL2Q5HYW2 709 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 OVOS1Q6IE37 1185 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 PRMT9Q6P2P2 845 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 OR6P1Q8NGX9 317 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 FAM81AQ8TBF8 368 aa16.38■□□□□ 0.21
CLCNKA-203ENST00000439316 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms