RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LIPIQ6XZB0 460 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 KCNMB4Q86W47 210 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 CAMKK1Q8N5S9 505 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 UHMK1Q8TAS1 419 aaKnown RBP20.68■□□□□ 0.9
CHD3-204ENST00000439235 EID2BQ96D98 161 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 CYTH2Q99418 400 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 FAM167BQ9BTA0 163 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 WRAP53Q9BUR4 548 aaKnown RBP20.68■□□□□ 0.9
CHD3-204ENST00000439235 CDH19Q9H159 772 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 KDM4CQ9H3R0 1056 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 ACSS3Q9H6R3 686 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 PREBQ9HCU5 417 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 PPANQ9NQ55 473 aaKnown RBP20.68■□□□□ 0.9
CHD3-204ENST00000439235 MOCS1Q9NZB8 636 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 USP36Q9P275 1121 aaKnown RBP20.68■□□□□ 0.9
CHD3-204ENST00000439235 GGT7Q9UJ14 662 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 MYLKQ15746 1914 aa20.68■□□□□ 0.9
CHD3-204ENST00000439235 H7C0S8 307 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 PDGFBP01127 241 aaPredicted RBP20.67■□□□□ 0.9
CHD3-204ENST00000439235 CXCL12P48061 93 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 SPINT3P49223 89 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 ARSDP51689 593 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 ADPRHP54922 357 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 TAS2R38P59533 333 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 NAB1Q13506 487 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 THOC5Q13769 683 aaKnown RBP20.67■□□□□ 0.9
CHD3-204ENST00000439235 PTPRCAPQ14761 206 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 STAT4Q14765 748 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 TRMT10BQ6PF06 316 aaKnown RBP20.67■□□□□ 0.9
CHD3-204ENST00000439235 MAMSTRQ6ZN01 415 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 RASSF3Q86WH2 238 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 LMNTD2Q8IXW0 634 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 OR6P1Q8NGX9 317 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 OR14C36Q8NHC7 312 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 HDAC10Q969S8 669 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 CDKN2AIPNLQ96HQ2 116 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 TBATAQ96M53 351 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 PLEKHG4BQ96PX9 1271 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 BPIFA1Q9NP55 256 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 ITM2CQ9NQX7 267 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 C2orf42Q9NWW7 574 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 DLGAP2Q9P1A6 1054 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 FKBPLQ9UIM3 349 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 APPL1Q9UKG1 709 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 PLAAQ9Y263 795 aa20.67■□□□□ 0.9
CHD3-204ENST00000439235 ZNF217O75362 1048 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 PCDH8O95206 1070 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 IGLV3-19P01714 112 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 IVLP07476 585 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 C6P13671 934 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 BPIP17213 487 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 ARCN1P48444 511 aaKnown RBP20.66■□□□□ 0.9
CHD3-204ENST00000439235 TPMTP51580 245 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 CLCN5P51795 746 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 EIF3BP55884 814 aaKnown RBP20.66■□□□□ 0.9
CHD3-204ENST00000439235 DCDC1P59894 354 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 IFFO1Q0D2I5 559 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 ACOX1Q15067 660 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 KIAA1161Q6NSJ0 714 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 HSD11B1LQ7Z5J1 315 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 NRSN1Q8IZ57 195 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 CALML6Q8TD86 181 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 PPCSQ9HAB8 311 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 SGK2Q9HBY8 427 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 KCTD5Q9NXV2 234 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 ZFATQ9P243 1243 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 NFKBIL1Q9UBC1 381 aaPredicted RBP20.66■□□□□ 0.9
CHD3-204ENST00000439235 RABGEF1Q9UJ41 708 aa20.66■□□□□ 0.9
CHD3-204ENST00000439235 EXOC1LA0A1B0GW35 172 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 CCDC162PA2VCL2 907 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 FAM159BA6NKW6 160 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 CCL22O00626 93 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 WNT9AO14904 365 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 LZTS3O60299 673 aaPredicted RBP20.65■□□□□ 0.9
CHD3-204ENST00000439235 MMP20O60882 483 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 GOT2P00505 430 aaKnown RBP20.65■□□□□ 0.9
CHD3-204ENST00000439235 ERVK-10P10266 1014 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 ARNTP27540 789 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 MC4RP32245 332 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 KBTBD12Q3ZCT8 623 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 ALS2CLQ60I27 953 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 NEK5Q6P3R8 708 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 LRIG3Q6UXM1 1119 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 CYP2U1Q7Z449 544 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 FAM124AQ86V42 546 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.65■□□□□ 0.9
CHD3-204ENST00000439235 SGSM3Q96HU1 749 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 COQ10AQ96MF6 247 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 BTBD1Q9H0C5 482 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 VIPAS39Q9H9C1 493 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 NSMCE4AQ9NXX6 385 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 SLC30A1Q9Y6M5 507 aa20.65■□□□□ 0.9
CHD3-204ENST00000439235 GLYATL1P3A0A0U1RQE8 302 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 LRRC72A6NJI9 287 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 ITGALP20701 1170 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 OXTRP30559 389 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 HSP90AA5PQ58FG0 334 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 NEPROQ6NW34 567 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 ZNF765Q7L2R6 523 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 TECPR1Q7Z6L1 1165 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms