RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RANGRFQ9HD47 186 aaPredicted RBP3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 CNGB3Q9NQW8 809 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SEPT11Q9NVA2 429 aaKnown RBP3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SELENONQ9NZV5 590 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 ADAM18Q9Y3Q7 739 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 NFS1Q9Y697 457 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SESN1Q9Y6P5 492 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 FSD2A1L4K1 749 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 CPED1A4D0V7 1026 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 J3KR12 359 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 TSPAN9O75954 239 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 MLYCDO95822 493 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 ACTN1P12814 892 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 SRCP12931 536 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 RARGP13631 454 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 PIK3CAP42336 1068 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 PRCPP42785 496 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 DRG2P55039 364 aaKnown RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 F2RL1P55085 397 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 SEC61A1P61619 476 aaKnown RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 ZSCAN23Q3MJ62 389 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 MMEL1Q495T6 779 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 SOWAHCQ53LP3 525 aaPredicted RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 SPATA1Q5VX52 437 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 ANKRD54Q6NXT1 300 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 KCTD18Q6PI47 426 aaPredicted RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 B3GNT6Q6ZMB0 384 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 GLDNQ6ZMI3 551 aaPredicted RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 QSOX2Q6ZRP7 698 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 SAMD14Q8IZD0 417 aaPredicted RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 CNPY4Q8N129 248 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 WFIKKN2Q8TEU8 576 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 MIB2Q96AX9 1013 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 RRNAD1Q96FB5 475 aaKnown RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 OR1F2PQ96R84 312 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 ZPBPQ9BS86 351 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 PCGF1Q9BSM1 259 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 C1QTNF5Q9BXJ0 243 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 ESRP2Q9H6T0 727 aaKnown RBP3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 WDR26Q9H7D7 661 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 POLR1BQ9H9Y6 1135 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 LTB4R2Q9NPC1 389 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
LSM1P1-201ENST00000438629 CLSPNQ9HAW4 1339 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 IGLV5-52A0A0A0MRZ9 124 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 A0A1W2PQF6 199 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 FRMD3A2A2Y4 597 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CLEC18AA5D8T8 446 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PROB1E7EW31 1015 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PTGES3LE9PB15 166 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 GPC4O75487 556 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 HIST1H2ABP04908 130 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 NGFRP08138 427 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 DAOP14920 347 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 IL7RP16871 459 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 ALOX12P18054 663 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 HIST1H2ADP20671 130 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 HOXA13P31271 388 aaPredicted RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 FASLGP48023 281 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 THBS3P49746 956 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CSNK2A1P68400 391 aaPredicted RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CEBPZQ03701 1054 aaKnown RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PRKG2Q13237 762 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 FHL1Q13642 323 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CALCRLQ16602 461 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CTF1Q16619 201 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 GPATCH4Q5T3I0 446 aaKnown RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 BRINP3Q76B58 766 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 HIST3H2AQ7L7L0 130 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PCGF5Q86SE9 256 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 ADGRF2Q8IZF7 708 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 TTC39CQ8N584 583 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CLEC18CQ8NCF0 446 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CSNK2A3Q8NEV1 391 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CREB3L4Q8TEY5 395 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 MARK4Q96L34 752 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 C1orf74Q96LT6 269 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CAMK1GQ96NX5 476 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 WDFY2Q96P53 400 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 ACOX2Q99424 681 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 MEIS3Q99687 375 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 SDF4Q9BRK5 362 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 WACQ9BTA9 647 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 C1QTNF1Q9BXJ1 281 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 TM6SF1Q9BZW5 370 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 SIL1Q9H173 461 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 TMX4Q9H1E5 349 aaPredicted RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 HIPK2Q9H2X6 1198 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PPP1R3EQ9H7J1 279 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 PCDH9Q9HC56 1237 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 CWC15Q9P013 229 aaKnown RBP3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 SNX9Q9Y5X1 595 aa3.81□□□□□ -1.8
LSM1P1-201ENST00000438629 RSF1Q96T23 1441 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms