RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MED15Q96RN5 788 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GSDMCQ9BYG8 508 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 TKTL2Q9H0I9 626 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ACTL8Q9H568 366 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 AKIRIN1Q9H9L7 192 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 MAGEF1Q9HAY2 307 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PCDH12Q9NPG4 1184 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PIGVQ9NUD9 493 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SIDT1Q9NXL6 827 aaKnown RBP12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 NTNG1Q9Y2I2 539 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 COQ4Q9Y3A0 265 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PLEKHM1Q9Y4G2 1056 aa12.28□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 TEX33O43247 280 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SRGAP2O75044 1071 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PIGNO95427 931 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RECKO95980 971 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ITGA3P26006 1051 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GNPDA1P46926 289 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 POLD3Q15054 466 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 STK38Q15208 465 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 VASH1Q7L8A9 365 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DRC7Q8IY82 874 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NCSTNQ92542 709 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ARHGEF38Q9NXL2 777 aa12.27□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 IGLV3-10A0A075B6K4 115 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 A6NL46 340 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CEACAM4O75871 244 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RECQL5O94762 991 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NADKO95544 446 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 XPAP23025 273 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 KELP23276 732 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TRIM23P36406 574 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CTBSQ01459 385 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ELP6Q0PNE2 266 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 IL10RAQ13651 578 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 UGT8Q16880 541 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 EFHC1Q5JVL4 640 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 WDR74Q6RFH5 385 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZNF783Q6ZMS7 281 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 IQCKQ8N0W5 287 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 OR10G6Q8NH81 332 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SLC38A3Q99624 504 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 WDCPQ9H6R7 721 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SERTAD1Q9UHV2 236 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 OSGIN2Q9Y236 505 aa12.26□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NDUFA10O95299 355 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CEACAM5P06731 702 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 HOXC4P09017 264 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GM2AP17900 193 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PTGIRP43119 386 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RAPGEF1Q13905 1077 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 UGP2Q16851 508 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DCAF17Q5H9S7 520 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FAM199XQ6PEV8 388 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LRRC31Q6UY01 552 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZSWIM9Q86XI8 627 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZNF295-AS1Q8N0V1 137 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 THAP4Q8WY91 577 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TRIM8Q9BZR9 551 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 WDR26Q9H7D7 661 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 COPG2Q9UBF2 871 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LNPEPQ9UIQ6 1025 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PADI1Q9ULC6 663 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PCDHGB7Q9Y5F8 929 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZNF469Q96JG9 3925 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DOCK4Q8N1I0 1966 aa12.25□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZNF185O15231 689 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PRICKLE3O43900 615 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 STX10O60499 249 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ICMTO60725 284 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 EML2O95834 649 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RPL13P26373 211 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PTGER4P35408 488 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MMP12P39900 470 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MAPK9P45984 424 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 POLD2P49005 469 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CXCR3P49682 368 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PER3P56645 1201 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MTA1Q13330 715 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RAPSNQ13702 412 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CRB2Q5IJ48 1285 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RASGRP3Q8IV61 690 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GUF1Q8N442 669 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 INPP5DQ92835 1189 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PAGE5Q96GU1 130 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 OR6C1Q96RD1 312 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms