RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 ITPKBP27987 946 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 SLC1A1P43005 524 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 CDK3Q00526 305 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 ILF3Q12906 894 aaKnown RBP eCLIP17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 C3orf38Q5JPI3 329 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 BROXQ5VW32 411 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 NLRP8Q86W28 1048 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 CCDC13Q8IYE1 715 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 NRSN1Q8IZ57 195 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 PQLC3Q8N755 202 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 WDR36Q8NI36 951 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 STRADBQ9C0K7 418 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 TMEM168Q9H0V1 697 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 CARS2Q9HA77 564 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 APPL1Q9UKG1 709 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 INTUQ9ULD6 942 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 SATB2Q9UPW6 733 aa17.52■□□□□ 0.4
SBDSP1-203ENST00000437201 ZFYVE26Q68DK2 2539 aa17.52■□□□□ 0.39
SBDSP1-203ENST00000437201 CCDC187A0A096LP49 1063 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 MTA2O94776 668 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 MAP3K6O95382 1288 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 GPR1P46091 355 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 UCNP55089 124 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 DSC2Q02487 901 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 GBE1Q04446 702 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 CCDC173Q0VFZ6 552 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 EIF3IQ13347 325 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 C14orf28Q4W4Y0 310 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 CERCAMQ5T4B2 595 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 LRRC38Q5VT99 294 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 LRRC66Q68CR7 880 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 ZNF765Q7L2R6 523 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 TECPR1Q7Z6L1 1165 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 TSPAN33Q86UF1 283 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 GPBAR1Q8TDU6 330 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 RAPGEF5Q92565 580 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 AP2M1Q96CW1 435 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 HIC2Q96JB3 615 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 TMEM74Q96NL1 305 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 SLC46A1Q96NT5 459 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 CHP1Q99653 195 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 TDRD1Q9BXT4 1180 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 ADGRE3Q9BY15 652 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 FRMD8Q9BZ67 464 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 DPH1Q9BZG8 443 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 LRRN3Q9H3W5 708 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 DTLQ9NZJ0 730 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 CHKBQ9Y259 395 aa17.51■□□□□ 0.39
SBDSP1-203ENST00000437201 CAPN8A6NHC0 703 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 NUDT21O43809 227 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 RPLP0P05388 317 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 CEACAM5P06731 702 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 IVLP07476 585 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 PTSQ03393 145 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 PPIDQ08752 370 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 PDK1Q15118 436 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 KCTD16Q68DU8 428 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 ADAMTSL4Q6UY14 1074 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 CPNE8Q86YQ8 564 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 CCNJLQ8IV13 435 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 SPACA3Q8IXA5 215 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 PELI3Q8N2H9 469 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 ARRDC2Q8TBH0 407 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 LIN37Q96GY3 246 aaPredicted RBP17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 BRD8Q9H0E9 1235 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 PCDH9Q9HC56 1237 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 ASCL3Q9NQ33 180 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 LRIT1Q9P2V4 623 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 HEY1Q9Y5J3 304 aa17.5■□□□□ 0.39
SBDSP1-203ENST00000437201 EIF4E1BA6NMX2 242 aaKnown RBP17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 B4DGG1 531 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 D6RAR5 112 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 APOL1O14791 398 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 NOBOXO60393 691 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 JCHAINP01591 159 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 HLA-DQB2P05538 268 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 GNPDA1P46926 289 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 CCL7P80098 99 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 TLE3Q04726 772 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 SLC10A2Q12908 348 aaPredicted RBP17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 HLTFQ14527 1009 aaKnown RBP eCLIP17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 TCEAL1Q15170 157 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 BZW1Q7L1Q6 419 aaKnown RBP17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 RHOT1Q8IXI2 618 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 EXD1Q8NHP7 514 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 CCHCR1Q8TD31 782 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 KCNE4Q8WWG9 221 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 UBL7Q96S82 380 aaPredicted RBP17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 CDH19Q9H159 772 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 ABCG8Q9H221 673 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 PRORYQ9H606 182 aa17.49■□□□□ 0.39
SBDSP1-203ENST00000437201 SUFUQ9UMX1 484 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms