RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR7A2PQ8NGA2 310 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CPNE2Q96FN4 548 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 EPB41L1Q9H4G0 881 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 MTF2Q9Y483 593 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 APOC4-APOC2K7ER74 178 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CCL16O15467 120 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 APOC2P02655 101 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 KLK3P07288 261 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 GRB10Q13322 594 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 C4orf46Q504U0 113 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 TTC27Q6P3X3 843 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 MYO19Q96H55 970 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 SPATA13Q96N96 652 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF726A6NNF4 738 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 TMEM150CB9EJG8 249 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 FPGTO14772 594 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 FFAR3O14843 346 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 GPR42O15529 346 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PSIP1O75475 530 aaKnown RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 GYPCP04921 128 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PRMT2P55345 433 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 ARF3P61204 181 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 ARF1P84077 181 aaKnown RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 TBX2Q13207 712 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 TCHHL1Q5QJ38 904 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PTCHD4Q6ZW05 846 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 UBE2R2Q712K3 238 aaPredicted RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 C1orf216Q8TAB5 229 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 MRPL57Q9BQC6 102 aaKnown RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CFAP97Q9P2B7 532 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CLEC4AQ9UMR7 237 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 NEMP2A6NFY4 417 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 ERBB2P04626 1255 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 RAB39AQ14964 217 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CPTPQ5TA50 214 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 HECTD2Q5U5R9 776 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 LCN1P1Q5VSP4 162 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 FRRS1Q6ZNA5 592 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 HIPK1Q86Z02 1210 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 NOD2Q9HC29 1040 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 BTN3A3O00478 584 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CLDN11O75508 207 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 RLN1P04808 185 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 SNRPB2P08579 225 aaKnown RBP11.19□□□□□ -0.62
SCN4A-201ENST00000435607 GRK6P43250 576 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CACNA2D1P54289 1103 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 BRMS1LQ5PSV4 323 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 IZUMO2Q6UXV1 221 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 MON1AQ86VX9 555 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 GAL3ST4Q96RP7 486 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 EQTNQ9NQ60 294 aa11.19□□□□□ -0.62
SCN4A-201ENST00000435607 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 CHADO15335 359 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ZCCHC18P0CG32 403 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 OR1D2P34982 312 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 RPL38P63173 70 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 OLR1P78380 273 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 GXYLT1Q4G148 440 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 WDR59Q6PJI9 974 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 TSTD1Q8NFU3 115 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PNPLA2Q96AD5 504 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 OGDHLQ9ULD0 1010 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 E5RJQ4 531 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 GMFGO60234 142 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 BDH1Q02338 343 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 HSF2Q03933 536 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SIRT2Q8IXJ6 389 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 MED14O60244 1454 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 FSBPO95073 299 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 FAM228BP0C875 321 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ANPEPP15144 967 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ATP4AP20648 1035 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 MIPP30301 263 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 RFX4Q33E94 735 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 CWF19L1Q69YN2 538 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 C1orf186Q6ZWK4 172 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 GPR142Q7Z601 462 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 LCN9Q8WX39 176 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PAIP1Q9H074 479 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SAMHD1Q9Y3Z3 626 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 MICAL3Q7RTP6 2002 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 NUAK1O60285 661 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PCSK2P16519 638 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 CAPZA1P52907 286 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PNLIPRP1P54315 467 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 RIN1Q13671 783 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SLC9A4Q6AI14 798 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms