RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF37AP17032 561 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 ATP5C1P36542 298 aaKnown RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 PEX19P40855 299 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 OXCT1P55809 520 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 RAD51Q06609 339 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 MBTPS1Q14703 1052 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TAF1AQ15573 450 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 UGT3A2Q3SY77 523 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 UGT2A3Q6UWM9 527 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 LDB1Q86U70 411 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 CIR1Q86X95 450 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 GALNT15Q8N3T1 639 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 NKAPQ8N5F7 415 aaKnown RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 TTC9BQ8N6N2 239 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 PCDH20Q8N6Y1 951 aaKnown RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 HMGCLL1Q8TB92 370 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 GPR152Q8TDT2 470 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 KIAA1191Q96A73 305 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 PTERQ96BW5 349 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 CDKN2AIPNLQ96HQ2 116 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 GCNAQ96QF7 691 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 PSKH2Q96QS6 385 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TRIB3Q96RU7 358 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 DDX50Q9BQ39 737 aaKnown RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 TRIM15Q9C019 465 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 DERL2Q9GZP9 239 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TAS2R13Q9NYV9 303 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 CCDC167Q9P0B6 97 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TMEM181Q9P2C4 612 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TBC1D30Q9Y2I9 924 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 CRYL1Q9Y2S2 319 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 ARL5AQ9Y689 179 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 SLC4A7Q9Y6M7 1214 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TMEM88BA6NKF7 163 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 STX16-NPEPL1H3BU86 382 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 UBFD1O14562 309 aaKnown RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 MUSKO15146 869 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 INSIG1O15503 277 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 TBC1D4O60343 1298 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 NDUFS3O75489 264 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CLDN11O75508 207 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 UPP2O95045 317 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 LBPP18428 481 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CD9P21926 228 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 GPX3P22352 226 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 HOXD9P28356 352 aaPredicted RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 ZNF140P52738 457 aaPredicted RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 RHDQ02161 417 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 GALNT3Q14435 633 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 KANK2Q63ZY3 851 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 IL31Q6EBC2 164 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 C8orf82Q6P1X6 216 aaPredicted RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 FUT10Q6P4F1 479 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 TXNDC11Q6PKC3 985 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 RNF19BQ6ZMZ0 732 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CHST9Q7L1S5 443 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 SPATA19Q7Z5L4 167 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 PIM3Q86V86 326 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 AHI1Q8N157 1196 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 MIER2Q8N344 545 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 RYBPQ8N488 228 aaPredicted RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 OR52K2Q8NGK3 314 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 OR13C4Q8NGS5 318 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 TSPEARQ8WU66 669 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 LPGAT1Q92604 370 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.4□□□□□ -0.74
CD44-210ENST00000434472 PLD4Q96BZ4 506 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 PKP2Q99959 881 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 NUSAP1Q9BXS6 441 aaKnown RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 MRPL9Q9BYD2 267 aaKnown RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 SEZ6LQ9BYH1 1024 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 EPB41L1Q9H4G0 881 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CCSER2Q9H7U1 834 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 TNFRSF12AQ9NP84 129 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 MID1IP1Q9NPA3 183 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 PAPOLBQ9NRJ5 636 aaKnown RBP10.4□□□□□ -0.74
CD44-210ENST00000434472 GID8Q9NWU2 228 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CD300AQ9UGN4 299 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 CASP8AP2Q9UKL3 1982 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 RNF112Q9ULX5 631 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 AP4S1Q9Y587 144 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 COMMD10Q9Y6G5 202 aa10.4□□□□□ -0.74
CD44-210ENST00000434472 C15orf38-AP3S2A0A0A6YYH1 394 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 TCRBV3S1A0A5B6 114 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ILVBLA1L0T0 632 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 LCHNA4D1U4 455 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 CCL22O00626 93 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ENPP3O14638 875 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 STX16O14662 325 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms