RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 GP1BAP07359 652 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 GOLGA6DP0CG33 693 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 JUPP14923 745 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 PTPN7P35236 360 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 RPIAP49247 311 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 STC1P52823 247 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CDK3Q00526 305 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CDK18Q07002 472 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 WASHC5Q12768 1159 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 XRCC4Q13426 336 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 NR0B2Q15466 257 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 QPCTQ16769 361 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 ST3GAL2Q16842 350 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC181Q5TID7 509 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 B4GALNT4Q76KP1 1039 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 RD3Q7Z3Z2 195 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 PEX26Q7Z412 305 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 ZC3H18Q86VM9 953 aaKnown RBP9.8□□□□□ -0.84
HDAC6-207ENST00000430858 HEATR4Q86WZ0 1026 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 GKN2Q86XP6 184 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 NRSN1Q8IZ57 195 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 PELI3Q8N2H9 469 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 SCG3Q8WXD2 468 aaKnown RBP9.8□□□□□ -0.84
HDAC6-207ENST00000430858 OR1E3Q8WZA6 343 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 TADA1Q96BN2 335 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 AP2M1Q96CW1 435 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 PDXPQ96GD0 296 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 QKIQ96PU8 341 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC6-207ENST00000430858 RBM15Q96T37 977 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC6-207ENST00000430858 FERMT1Q9BQL6 677 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 DESI2Q9BSY9 194 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 BOCQ9BWV1 1114 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 LGR4Q9BXB1 951 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 OSBPL8Q9BZF1 889 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 CLPBQ9H078 707 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 GLOD4Q9HC38 313 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 FGF22Q9HCT0 170 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 GOLGA6AQ9NYA3 693 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 AMFRQ9UKV5 643 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 SHROOM3Q8TF72 1996 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 ANKRD36A6QL64 1941 aa9.8□□□□□ -0.84
HDAC6-207ENST00000430858 LY6G6EA0A0G2JKS1 128 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 A0A0U1RQS6 177 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 C1orf232A0A0U1RR37 186 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 PRSS38A1L453 326 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 RGSL1A5PLK6 1076 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 MIF4GDA9UHW6 222 aaKnown RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TJP3O95049 919 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 CLDN7O95471 211 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 GPR1P46091 355 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 NOMO1Q15155 1222 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 PCSK7Q16549 785 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 CDKN3Q16667 212 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 HES3Q5TGS1 186 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC70Q6NSX1 233 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 PID1Q7Z2X4 250 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 UBL4BQ8N7F7 174 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 ARL10Q8N8L6 244 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC112Q8NEF3 446 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 IFI44Q8TCB0 444 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 HTR3CQ8WXA8 447 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 ALG3Q92685 438 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 NAT6Q93015 286 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 SMIM14Q96QK8 99 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 FCRL5Q96RD9 977 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TRIB3Q96RU7 358 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 SRPK1Q96SB4 655 aaKnown RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TSGA10Q9BZW7 698 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 ABCG8Q9H221 673 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 MRPL40Q9NQ50 206 aaKnown RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 PKD2L2Q9NZM6 624 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 KLHL8Q9P2G9 620 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TRIM10Q9UDY6 481 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 FAM153AQ9UHL3 310 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 CD84Q9UIB8 345 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 MOSPD1Q9UJG1 213 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TRHDEQ9UKU6 1024 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 U3KQA8 63 aa9.79□□□□□ -0.84
HDAC6-207ENST00000430858 ARID1BQ8NFD5 2236 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-207ENST00000430858 TPRP12270 2363 aaKnown RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 FAM149AA5PLN7 773 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 H7C0C1 242 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ZNF189O75820 626 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 NDST3O95803 873 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 MT-CYBP00156 380 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SOD1P00441 154 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 EPOP01588 193 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CEACAM5P06731 702 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms