RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KDSRQ06136 332 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SCAPQ12770 1279 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 RGS21Q2M5E4 152 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ZBED5Q49AG3 693 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 HSF5Q4G112 596 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 TANGO2Q6ICL3 276 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 MFSD7Q6UXD7 560 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 C14orf80Q86SX3 495 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 CIR1Q86X95 450 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TRIML2Q8N7C3 387 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ZNF641Q96N77 438 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 FAM96AQ9H5X1 160 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TRNAU1APQ9NX07 287 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 NCKIPSDQ9NZQ3 722 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ERGIC3Q9Y282 383 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 IFT52Q9Y366 437 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 NOX1Q9Y5S8 564 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 FAM237BA0A1B0GVD1 139 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SDR42E2A6NKP2 422 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 HEPACAM2A8MVW5 462 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 E9PAM4 449 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 EEF2KO00418 725 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 KPNA4O00629 521 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 GREM1O60565 184 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ZBTB11O95625 1053 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 KRT10P13645 584 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TACR2P21452 398 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 FCARP24071 287 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 HOXD11P31277 338 aaPredicted RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 ARL4AP40617 200 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TPI1P60174 286 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 DYNLT1P63172 113 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 STX3Q13277 289 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 DPYSL3Q14195 570 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 DPYSL2Q16555 572 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 PARM1Q6UWI2 310 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 Q6ZNB5 142 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 CHERPQ8IWX8 916 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 LGI2Q8N0V4 545 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TDRD5Q8NAT2 981 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 FGF14Q92915 247 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 MYEOVQ96EZ4 313 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ZFYVE19Q96K21 471 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 PWWP2AQ96N64 755 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 HEMGNQ9BXL5 484 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 NDEL1Q9GZM8 345 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 PAIP1Q9H074 479 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 ACSS3Q9H6R3 686 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ZFP14Q9HCL3 533 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 DOLKQ9UPQ8 538 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ERVK-11Q9UQG0 969 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 COL4A3Q01955 1670 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 C2CD4DB7Z1M9 353 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 F5H5T6 163 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 RSL1D1O76021 490 aaKnown RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 LRIG2O94898 1065 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 IL9P15248 144 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 SGSHP51688 502 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 COPAP53621 1224 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 ESRRGP62508 458 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 PDIA2Q13087 525 aaKnown RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 EFTUD2Q15029 972 aaKnown RBP eCLIP11.44□□□□□ -0.58
CECR3-201ENST00000428828 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 ADGRF1Q5T601 910 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 TMEM214Q6NUQ4 689 aaKnown RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 FBXL22Q6P050 247 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 VITQ6UXI7 678 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 SPOCD1Q6ZMY3 1216 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 HTR3DQ70Z44 454 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 RFX6Q8HWS3 928 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 CFAP52Q8N1V2 620 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 EXD1Q8NHP7 514 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 BPIFB1Q8TDL5 484 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 DLG3Q92796 817 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 CNDP2Q96KP4 475 aaKnown RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
CECR3-201ENST00000428828 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 MKS1Q9NXB0 559 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 MPP6Q9NZW5 540 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
CECR3-201ENST00000428828 E2F8A0AVK6 867 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 WDR91A4D1P6 747 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 C3orf70A6NLC5 250 aaPredicted RBP11.43□□□□□ -0.58
CECR3-201ENST00000428828 PRR5-ARHGAP8B1AHC4 643 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 H3BNH8 94 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 SLC22A1O15245 554 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 ALOX5P09917 674 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 PSMC3P17980 439 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 ARSEP51690 589 aa11.43□□□□□ -0.58
CECR3-201ENST00000428828 MLLT6P55198 1093 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms