RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 DDA1Q9BW61 102 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 TEX101Q9BY14 249 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 ASPSCR1Q9BZE9 553 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 TUBD1Q9UJT1 453 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 IGHV1OR21-1A0A087WYE8 117 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 TTC24A2A3L6 582 aaPredicted RBP18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 PPM1DO15297 605 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 RAD1O60671 282 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 TPM2P07951 284 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 THRAP10827 490 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 ETV3P41162 512 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 IL10RBQ08334 325 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 PEX6Q13608 980 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 CA9Q16790 459 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 RAET1GQ6H3X3 334 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 DOK6Q6PKX4 331 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 NRSN1Q8IZ57 195 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 NAGSQ8N159 534 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 PCMTD1Q96MG8 357 aaPredicted RBP18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 CATSPER2Q96P56 530 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 OCIAD1Q9NX40 245 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 KCNK4Q9NYG8 393 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 TMEM9Q9P0T7 183 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 ST14Q9Y5Y6 855 aa18.28■□□□□ 0.52
UPK3BP1-201ENST00000428678 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 EFCAB7A8K855 629 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 HEXIM1O94992 359 aaKnown RBP18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 CPP00450 1065 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 PRKAR1AP10644 381 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 ERCC2P18074 760 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 VIPR1P32241 457 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 ADCY8P40145 1251 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 ACTR1BP42025 376 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 POLD2P49005 469 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 RENBPP51606 427 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 ACTR1AP61163 376 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 CDK3Q00526 305 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 OGDHQ02218 1023 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 KRT31Q15323 416 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 IGFBP7Q16270 282 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 DCAF12Q5T6F0 453 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 NPWQ8N729 165 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 DTD2Q96FN9 168 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 KCTD15Q96SI1 283 aaPredicted RBP18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 DPYSL5Q9BPU6 564 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 KCTD5Q9NXV2 234 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 PCSK1NQ9UHG2 260 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 PCDHGC4Q9Y5F7 938 aa18.27■□□□□ 0.52
UPK3BP1-201ENST00000428678 B4E171 279 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 NTRK1P04629 796 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 IVLP07476 585 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 PSMA2P25787 234 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 CASRP41180 1078 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 TSPAN7P41732 249 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 RAB15P59190 212 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 FOXK1P85037 733 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 ZNF235Q14590 738 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 LBRQ14739 615 aaKnown RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 PPP6R3Q5H9R7 873 aaPredicted RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 TMCO4Q5TGY1 634 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 ANKS6Q68DC2 871 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 HSD11B1LQ7Z5J1 315 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 C9orf43Q8TAL5 461 aaPredicted RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 KIAA1143Q96AT1 154 aaPredicted RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 AHCYL2Q96HN2 611 aaKnown RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 AGPAT1Q99943 283 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 GPN2Q9H9Y4 310 aaPredicted RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 ZNF71Q9NQZ8 489 aaPredicted RBP18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 ANAPC2Q9UJX6 822 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 SLC17A4Q9Y2C5 497 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 PLEKHM1Q9Y4G2 1056 aa18.26■□□□□ 0.51
UPK3BP1-201ENST00000428678 A0A1W2PQ67 120 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 EIF3CLB5ME19 914 aaKnown RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 CAPN5O15484 640 aaPredicted RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 NKX2-8O15522 239 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 HTRA2O43464 458 aaPredicted RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 SOCS5O75159 536 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 CYP2A6P11509 494 aaPredicted RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 NFKBIAP25963 317 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 GPLD1P80108 840 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 SLC10A7Q0GE19 358 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 SQSTM1Q13501 440 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 TMEM71Q6P5X7 295 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 Q6ZVL8 140 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 ZNF761Q86XN6 746 aaPredicted RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 MCOLN2Q8IZK6 566 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 SLC45A3Q96JT2 553 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 OR2M4Q96R27 311 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 EIF3CQ99613 913 aaKnown RBP18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 PILRAQ9UKJ1 303 aa18.25■□□□□ 0.51
UPK3BP1-201ENST00000428678 TRBV23OR9-2A0A075B6M9 112 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 DUX1O43812 170 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms