RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PEX5P50542 639 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 BLKP51451 505 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 HK3P52790 923 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KIAA1024LP59773 190 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SRP54P61011 504 aaKnown RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SH3BP2P78314 561 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ILKQ13418 452 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TFDP2Q14188 446 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CDKN3Q16667 212 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ZCCHC8Q6NZY4 707 aaKnown RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SPOCD1Q6ZMY3 1216 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 Q6ZVL8 140 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KIAA1328Q86T90 577 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 HEATR4Q86WZ0 1026 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KATNAL2Q8IYT4 538 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 NDUFAF2Q8N183 169 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PELI3Q8N2H9 469 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CNTD1Q8N815 330 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TPCN2Q8NHX9 752 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 OR1E3Q8WZA6 343 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 FUBP1Q96AE4 644 aaKnown RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DTD2Q96FN9 168 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 AGAP3Q96P47 875 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 BAG1Q99933 345 aaPredicted RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SUDS3Q9H7L9 328 aaPredicted RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SAE1Q9UBE0 346 aaPredicted RBP9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CD84Q9UIB8 345 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SALL4Q9UJQ4 1053 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CSNK1G3Q9Y6M4 447 aa9.22□□□□□ -0.93
RFX3-AS1-202ENST00000427722 hCG_1818297A0A087WSY0 165 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LY6G6EA0A0G2JKS1 128 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 A0A0J9YYE9 177 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CPED1A4D0V7 1026 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMEM202A6NGA9 273 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PCNX2A6NKB5 2137 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LMO7DNF2Z398 122 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PSMD11O00231 422 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SIAH2O43255 324 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FZD6O60353 706 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZRANB2O95218 330 aaKnown RBP eCLIP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRBC1P01850 177 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC4A1P02730 911 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MMP2P08253 660 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CDK4P11802 303 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MYCLP1P12525 358 aaPredicted RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CTSEP14091 401 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 JUPP14923 745 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TGM2P21980 687 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KELP23276 732 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 VAV2P52735 878 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CDK3Q00526 305 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PRKD1Q15139 912 aaPredicted RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ELOCQ15369 112 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NR0B2Q15466 257 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TAZQ16635 292 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 QPCTQ16769 361 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TFDP3Q5H9I0 405 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RAET1GQ6H3X3 334 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PNCKQ6P2M8 343 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GUSBP11Q6P575 273 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CRTC1Q6UUV9 634 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RFLNAQ6ZTI6 216 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 EFL1Q7Z2Z2 1120 aaKnown RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMPRSS12Q86WS5 348 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FSTL5Q8N475 847 aaPredicted RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FAM181AQ8N9Y4 354 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KYQ8NBH2 561 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MDM1Q8TC05 714 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 IFI44Q8TCB0 444 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TFB1MQ8WVM0 346 aaKnown RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SCRN2Q96FV2 425 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TBATAQ96M53 351 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DESI2Q9BSY9 194 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LGR4Q9BXB1 951 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CLPBQ9H078 707 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 BRD8Q9H0E9 1235 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PCDH9Q9HC56 1237 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MRPL40Q9NQ50 206 aaKnown RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PHPT1Q9NRX4 125 aaPredicted RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MOSPD1Q9UJG1 213 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DUSP10Q9Y6W6 482 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 U3KQA8 63 aa9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MAP1BP46821 2468 aaKnown RBP9.21□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 C1orf232A0A0U1RR37 186 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GRID2IPA4D2P6 1211 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GOLGA6L6A8MZA4 724 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 F5H423 210 aaPredicted RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TPP1O14773 563 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 YY2O15391 372 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PRLP01236 227 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms