RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GPNMBQ14956 572 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 PAIP1Q9H074 479 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 KANSL1LA0AUZ9 987 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 AXIN1O15169 862 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 B4GAT1O43505 415 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 NRP2O60462 931 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 SERPINH1P50454 418 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 MYBPC1Q00872 1141 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 NUMA1Q14980 2115 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 LSMEM2Q8N112 164 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 GFM2Q969S9 779 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 EGFL8Q99944 293 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 CATSPERBQ9H7T0 1116 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 ZBTB26Q9HCK0 441 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 TRHDEQ9UKU6 1024 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 PCDHGC4Q9Y5F7 938 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 SNX2O60749 519 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 NDUFS3O75489 264 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 LTA4HP09960 611 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 YBX1P67809 324 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 INSCQ1MX18 579 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 FAM43BQ6ZT52 329 aaPredicted RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 FBXO30Q8TB52 745 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 DGCR6LQ9BY27 220 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 ZFP14Q9HCL3 533 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 ZNHIT2Q9UHR6 403 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 C7orf72A4D263 438 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 TCAF2A6NFQ2 919 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 CDKN2DP55273 166 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 ZNF423Q2M1K9 1284 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 PGAM4Q8N0Y7 254 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 KDM1BQ8NB78 822 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 GPR22Q99680 433 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 ALG2Q9H553 416 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 EML4Q9HC35 981 aaKnown RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 CNGB3Q9NQW8 809 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 TCAF1Q9Y4C2 921 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 E9PAM4 449 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 TRIM38O00635 465 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 E2F6O75461 281 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 F9P00740 461 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 TFAP2AP05549 437 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 CDKN1CP49918 316 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 PIGFQ07326 219 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 FNDC5Q8NAU1 212 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 OR7D4Q8NG98 312 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 DGCR14Q96DF8 476 aaKnown RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 AKTIPQ9H8T0 292 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 SPAG4Q9NPE6 437 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 SLC38A7Q9NVC3 462 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 B4GALT3O60512 393 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 IL10P22301 178 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 LHX1P48742 406 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 PAFAH1B3Q15102 231 aaKnown RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 XKR5Q6UX68 686 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 B3GNT6Q6ZMB0 384 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 FIG4Q92562 907 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 C11orf84Q9BUA3 381 aaPredicted RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 THUMPD3Q9BV44 507 aaKnown RBP13.37□□□□□ -0.27
USP42-203ENST00000426246 TM6SF2Q9BZW4 377 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 SLAMF8Q9P0V8 285 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 ANGPTL3Q9Y5C1 460 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 TANC1Q9C0D5 1861 aa13.37□□□□□ -0.27
USP42-203ENST00000426246 CLOCKO15516 846 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 GMNNO75496 209 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 FBXO21O94952 628 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 GLP2RO95838 553 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 SBK3P0C264 359 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 ODC1P11926 461 aa13.36□□□□□ -0.27
USP42-203ENST00000426246 EEF1DP29692 281 aaKnown RBP13.36□□□□□ -0.27
USP42-203ENST00000426246 PRDX3P30048 256 aaKnown RBP13.36□□□□□ -0.27
USP42-203ENST00000426246 INHBCP55103 352 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms