RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 TMEM202A6NGA9 273 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 A8MZ25 164 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ASAP2O43150 1006 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ITM2AO43736 263 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 RNASEH2AO75792 299 aaKnown RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 VNN2O95498 520 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ZBTB11O95625 1053 aaPredicted RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MAOAP21397 527 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HNRNPH1P31943 449 aaKnown RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MXI1P50539 228 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 RAD23BP54727 409 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SEC61A1P61619 476 aaKnown RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 NIPAL4Q0D2K0 466 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 EFNB3Q15768 340 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FAM76BQ5HYJ3 339 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FAM69BQ5VUD6 431 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 TTI2Q6NXR4 508 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 TSSK4Q6SA08 328 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 CLIP4Q8N3C7 705 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 PDZD7Q9H5P4 517 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 KIF9Q9HAQ2 790 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 PLEKHA5Q9HAU0 1116 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HCFC1R1Q9NWW0 138 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MAP3K20Q9NYL2 800 aaKnown RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 EHD2Q9NZN4 543 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DLGAP2Q9P1A6 1054 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FBXO9Q9UK97 447 aaPredicted RBP4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 LYVE1Q9Y5Y7 322 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 CEPT1Q9Y6K0 416 aa4.94□□□□□ -1.62
RAB3GAP1-202ENST00000425393 RUSC2Q8N2Y8 1516 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FAM237BA0A1B0GVD1 139 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DYTNA2CJ06 578 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SNAP23O00161 211 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HSPA12AO43301 675 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DOK2O60496 412 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ZBED4O75132 1171 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MTA2O94776 668 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 OR2C1O95371 312 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ARL3P36405 182 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 PIGAP37287 484 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 UBA7P41226 1012 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 LMOD3Q0VAK6 560 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ITGADQ13349 1161 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FRG1Q14331 258 aaKnown RBP4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DRAP1Q14919 205 aaPredicted RBP4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MED22Q15528 200 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 TDRD12Q587J7 1177 aaKnown RBP4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SPSB3Q6PJ21 355 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FRMD1Q8N878 549 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SMARCE1Q969G3 411 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 WBP1Q96G27 269 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 LRFN5Q96NI6 719 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 LTB4R2Q9NPC1 389 aa4.93□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SRRM3A6NNA2 597 aaPredicted RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 EIF3CLB5ME19 914 aaKnown RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SCAMP1O15126 338 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HCRTR2O43614 444 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 IPO7O95373 1038 aaKnown RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 CYC1P08574 325 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DDX5P17844 614 aaKnown RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ITGB8P26012 769 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 F2RL1P55085 397 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ARF3P61204 181 aaPredicted RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ARF1P84077 181 aaKnown RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 TRAF3Q13114 568 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MEA1Q16626 185 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 MMEL1Q495T6 779 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SPATA1Q5VX52 437 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FAM205BPQ63HN1 556 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 PQLC2Q6ZP29 291 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SHFQ7M4L6 423 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ARHGEF26Q96DR7 871 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 TMEM47Q9BQJ4 181 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HAUS8Q9BT25 410 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 C1QTNF4Q9BXJ3 329 aa4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ERRFI1Q9UJM3 462 aaPredicted RBP4.92□□□□□ -1.62
RAB3GAP1-202ENST00000425393 A0A0U1RQJ8 604 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 PLSCR5A0PG75 271 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 FRMD3A2A2Y4 597 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DENND3A2RUS2 1198 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 AGAP14A8MT82 685 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ZNF12P17014 697 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ZNF182P17025 639 aaPredicted RBP4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 HOXD13P35453 343 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 METAP2P50579 478 aaKnown RBP eCLIP4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 DRG2P55039 364 aaKnown RBP4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 BNC1Q01954 994 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 EEF1A2Q05639 463 aaKnown RBP4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 NAE1Q13564 534 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 ZNF718Q3SXZ3 478 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 CDONQ4KMG0 1287 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 JADE1Q6IE81 842 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 SARM1Q6SZW1 724 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 CLEC4GQ6UXB4 293 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 IKBIPQ70UQ0 350 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 BRINP3Q76B58 766 aa4.91□□□□□ -1.62
RAB3GAP1-202ENST00000425393 GSTA5Q7RTV2 222 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms