RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TBC1D3GQ6DHY5 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3CQ6IPX1 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 LIPIQ6XZB0 460 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3Q8IZP1 549 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 RUBCNQ92622 972 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 FAM136AQ96C01 138 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 LRIG1Q96JA1 1093 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 SPATA6Q9NWH7 488 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 FADS3Q9Y5Q0 445 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 AREL1O15033 823 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 POLBP06746 335 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 SRSF5Q13243 272 aaKnown RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 CASP8Q14790 479 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TAF1AQ15573 450 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ZNF789Q5FWF6 425 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TMEM135Q86UB9 458 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TMEM105Q8N8V8 129 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 POLMQ9NP87 494 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TREX1Q9NSU2 369 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 IL17CQ9P0M4 197 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 DLGAP2Q9P1A6 1054 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TBK1Q9UHD2 729 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TLDC2A0PJX2 215 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 C2orf81A6NN90 581 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 SMAPO00193 183 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 MTX2O75431 263 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PAK4O96013 591 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ADH1BP00325 375 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 GOT2P00505 430 aaKnown RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 C6P13671 934 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 VIPR1P32241 457 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ADPRHP54922 357 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 SLC14A2Q15849 920 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ERAP2Q6P179 960 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 CLDN23Q96B33 292 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 CDKN2AIPNLQ96HQ2 116 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 NELL2Q99435 816 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 DKK3Q9UBP4 350 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ZFR2Q9UPR6 939 aaKnown RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 SLCO1B1Q9Y6L6 691 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 CRTAMO95727 393 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 GMPRP36959 345 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PRAMEP78395 509 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 MPP1Q00013 466 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 FGL2Q14314 439 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PSAPL1Q6NUJ1 521 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 TRIM74Q86UV6 250 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 PIANPQ8IYJ0 282 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ZIM3Q96PE6 472 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 IL26Q9NPH9 171 aa13.42□□□□□ -0.26
PRPF39-202ENST00000424478 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-202ENST00000424478 EML5Q05BV3 1969 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 CHURC1-FNTBB4DL54 471 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 SLC31A1O15431 190 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 MC4RP32245 332 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 PEX6Q13608 980 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 KCNMB4Q86W47 210 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 RASSF3Q86WH2 238 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 EIF1ADQ8N9N8 165 aaKnown RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 GSDMBQ8TAX9 411 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 CERS2Q96G23 380 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 HDAC8Q9BY41 377 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 PKP3Q9Y446 797 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 GAPDHSO14556 408 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 INPP4BO15327 924 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 RECQL5O94762 991 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 HMGCLP35914 325 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 ARCN1P48444 511 aaKnown RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 RPL26P61254 145 aaKnown RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 ZRANB3Q5FWF4 1079 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 PLA2G15Q8NCC3 412 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
PRPF39-202ENST00000424478 C6orf106Q9H6K1 298 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 RPL26L1Q9UNX3 145 aaKnown RBP13.41□□□□□ -0.26
PRPF39-202ENST00000424478 A0A1W2PQU0 124 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 USP1O94782 785 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 C1QAP02745 245 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 CXCL12P48061 93 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 TCEA2Q15560 299 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 CHRNA6Q15825 494 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 ACVR1CQ8NER5 493 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms