RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 PSMD11O00231 422 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 ZIC2O95409 532 aaPredicted RBP16.1■□□□□ 0.17
SNHG17-205ENST00000424235 PDHA1P08559 390 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 LHCGRP22888 699 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
SNHG17-205ENST00000424235 CD86P42081 329 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 SLC1A1P43005 524 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 TNNT3P45378 269 aaPredicted RBP16.1■□□□□ 0.17
SNHG17-205ENST00000424235 ILF3Q12906 894 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■□□□ 13.2
SNHG17-205ENST00000424235 PDK1Q15118 436 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 LLGL1Q15334 1064 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 LVRNQ6Q4G3 990 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 KDELC2Q7Z4H8 507 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 Q8N9G6 341 aaPredicted RBP16.1■□□□□ 0.17
SNHG17-205ENST00000424235 MAML1Q92585 1016 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 FAF2Q96CS3 445 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 AP2M1Q96CW1 435 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 HDAC11Q96DB2 347 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 NAF1Q96HR8 494 aaKnown RBP16.1■□□□□ 0.17
SNHG17-205ENST00000424235 LGR4Q9BXB1 951 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 TMEM168Q9H0V1 697 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 PCDH9Q9HC56 1237 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 AMACRQ9UHK6 382 aa16.1■□□□□ 0.17
SNHG17-205ENST00000424235 C1orf232A0A0U1RR37 186 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 ASMTLO95671 621 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 COMTP21964 271 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 RBMS1P29558 406 aaKnown RBP16.09■□□□□ 0.17
SNHG17-205ENST00000424235 CDK3Q00526 305 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 PCSK7Q16549 785 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 SARM1Q6SZW1 724 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 NPNTQ6UXI9 565 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
SNHG17-205ENST00000424235 SDR16C5Q8N3Y7 309 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 WDR48Q8TAF3 677 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 KIAA1524Q8TCG1 905 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 PIH1D2Q8WWB5 315 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 SMIM14Q96QK8 99 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 GFM1Q96RP9 751 aaKnown RBP16.09■□□□□ 0.17
SNHG17-205ENST00000424235 RBM15Q96T37 977 aaKnown RBP eCLIP16.09■□□□□ 0.178e-7■■■□□ 18.9
SNHG17-205ENST00000424235 TDRD1Q9BXT4 1180 aaKnown RBP16.09■□□□□ 0.17
SNHG17-205ENST00000424235 ADGRE3Q9BY15 652 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 GSDMCQ9BYG8 508 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 INTUQ9ULD6 942 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 DGKBQ9Y6T7 804 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 ACACAQ13085 2346 aa16.09■□□□□ 0.17
SNHG17-205ENST00000424235 A0A0J9YYE9 177 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 CAPN8A6NHC0 703 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 AGRPO00253 132 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 TNFRSF10CO14798 259 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 INPP4BO15327 924 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 TRBC1P01850 177 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 RPLP0P05388 317 aaKnown RBP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 ZNF30P17039 623 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 GM2AP17900 193 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 PPIDQ08752 370 aaKnown RBP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 SLC10A2Q12908 348 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 GALNT3Q14435 633 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 RTP5Q14D33 572 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 ISXQ2M1V0 245 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 SLC30A9Q6PML9 568 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 PELI3Q8N2H9 469 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 FGF11Q92914 225 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 ATXN7L3BQ96GX2 97 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 MCCC1Q96RQ3 725 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 EPB41L5Q9HCM4 733 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 SATB2Q9UPW6 733 aa16.08■□□□□ 0.16
SNHG17-205ENST00000424235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 ARID1BQ8NFD5 2236 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-205ENST00000424235 LRRK1Q38SD2 2015 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 TCEA3O75764 348 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 MTA2O94776 668 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 HOXC4P09017 264 aaPredicted RBP16.07■□□□□ 0.16
SNHG17-205ENST00000424235 TRIM23P36406 574 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 POLD2P49005 469 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 NIPAL4Q0D2K0 466 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 ZBTB17Q13105 803 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 TFDP2Q14188 446 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 LRRC38Q5VT99 294 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 CDCP2Q5VXM1 449 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
SNHG17-205ENST00000424235 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 CACTIN-AS1Q8N1I8 211 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 PLD5Q8N7P1 536 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 OR6C4Q8NGE1 309 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 SCAMP4Q969E2 229 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 HAUS1Q96CS2 278 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 MLPHQ9BV36 600 aaPredicted RBP16.07■□□□□ 0.16
SNHG17-205ENST00000424235 CDH19Q9H159 772 aa16.07■□□□□ 0.16
SNHG17-205ENST00000424235 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms