RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 DOK6Q6PKX4 331 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 XKR5Q6UX68 686 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 Q6ZVL8 140 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 APTXQ7Z2E3 356 aaKnown RBP11.71□□□□□ -0.53
PLOD3-204ENST00000424135 TRIM74Q86UV6 250 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 ART4Q93070 314 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 NUS1Q96E22 293 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 RNF31Q96EP0 1072 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 DTD2Q96FN9 168 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 SP110Q9HB58 689 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 NOD2Q9HC29 1040 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 CWC15Q9P013 229 aaKnown RBP11.71□□□□□ -0.53
PLOD3-204ENST00000424135 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 TMEM98Q9Y2Y6 226 aa11.71□□□□□ -0.53
PLOD3-204ENST00000424135 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 NPIPB15A6NHN6 443 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-204ENST00000424135 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 NKX2-8O15522 239 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 DUX1O43812 170 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PPFIA2O75334 1257 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 THRAP10827 490 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 CTPS1P17812 591 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 CD82P27701 267 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 MIPP30301 263 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 VIPR1P32241 457 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 LIMK2P53671 638 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 POLE2P56282 527 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 MAXP61244 160 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 IL10RBQ08334 325 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 DPYSQ14117 519 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 ACAD10Q6JQN1 1059 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PAF1Q8N7H5 531 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 ZSCAN1Q8NBB4 408 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 NEK11Q8NG66 645 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PDCD6IPQ8WUM4 868 aaKnown RBP11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PSKH2Q96QS6 385 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 TAAR9Q96RI9 348 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 AGAP2Q99490 1192 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 GSDMCQ9BYG8 508 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 EPN3Q9H201 632 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PHPT1Q9NRX4 125 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-204ENST00000424135 TRNAU1APQ9NX07 287 aaKnown RBP11.7□□□□□ -0.54
PLOD3-204ENST00000424135 CD84Q9UIB8 345 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 SLC17A4Q9Y2C5 497 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
PLOD3-204ENST00000424135 GOLGA6CA6NDK9 693 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 GOLGA6BA6NDN3 693 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 HGSO14964 777 aaPredicted RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 DAPK3O43293 454 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 GOLGA6DP0CG33 693 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 AMPD1P23109 780 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 IL1R2P27930 398 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 HTR7P34969 479 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 AP1S1P61966 158 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 POLR2LP62875 67 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 ILF3Q12906 894 aaKnown RBP eCLIP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 FKBP15Q5T1M5 1219 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 PLEKHA7Q6IQ23 1121 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 BORAQ6PGQ7 559 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 MARK2Q7KZI7 788 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 TECPR1Q7Z6L1 1165 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 ZNF564Q8TBZ8 553 aaPredicted RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 CTRCQ99895 268 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 B3GNT4Q9C0J1 378 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 HSD3B7Q9H2F3 369 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 GOLGA6AQ9NYA3 693 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
PLOD3-204ENST00000424135 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
PLOD3-204ENST00000424135 USP9YO00507 2555 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-204ENST00000424135 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-204ENST00000424135 ANKRD62A6NC57 917 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 TMEM191CA6NGB0 347 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 A8MU76 341 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 RAD1O60671 282 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 CPP00450 1065 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 PDHA1P08559 390 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 PRKAR1AP10644 381 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 ACTR1BP42025 376 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 ACTR1AP61163 376 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 UBXN1Q04323 297 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 KCNAB2Q13303 367 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 RFTN1Q14699 578 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-204ENST00000424135 SNAP47Q5SQN1 464 aa11.68□□□□□ -0.54
PLOD3-204ENST00000424135 FAM182AQ5T1J6 154 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms