RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CREG2Q8IUH2 290 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 C17orf53Q8N3J3 647 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-205ENST00000423941 OXR1Q8N573 874 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 IPMKQ8NFU5 416 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 NUS1Q96E22 293 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 NAPGQ99747 312 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-205ENST00000423941 APOOQ9BUR5 198 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 ABCG8Q9H221 673 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 TRABDQ9H4I3 376 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 ZFYVE1Q9HBF4 777 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.44■□□□□ 0.54
HDAC6-205ENST00000423941 SPO11Q9Y5K1 396 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 LRP4O75096 1905 aa18.44■□□□□ 0.54
HDAC6-205ENST00000423941 BPTFQ12830 3046 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 K7ESM1 405 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 SOD1P00441 154 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 RPL22P35268 128 aaKnown RBP18.43■□□□□ 0.54
HDAC6-205ENST00000423941 ETF1P62495 437 aaKnown RBP18.43■□□□□ 0.54
HDAC6-205ENST00000423941 TTC27Q6P3X3 843 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 PTAR1Q7Z6K3 402 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-205ENST00000423941 PIP4P1Q86T03 277 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 TTC30BQ8N4P2 665 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 RTKNQ9BST9 563 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 TEX101Q9BY14 249 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 TM7SF3Q9NS93 570 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 HACD3Q9P035 362 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 ZNF711Q9Y462 761 aa18.43■□□□□ 0.54
HDAC6-205ENST00000423941 DNAH14Q0VDD8 3507 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 TDRD6O60522 2096 aaKnown RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 CTAGE9A4FU28 777 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 AURKAO14965 403 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 YKT6O15498 198 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PSMD3O43242 534 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 AP2A1O95782 977 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PIRTP0C851 137 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 ETS1P14921 441 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 TSHRP16473 764 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 HMGCLP35914 325 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 FDFT1P37268 417 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 DCDC1P59894 354 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 EIF2B5Q13144 721 aaKnown RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 OLIG2Q13516 323 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 SEMA5AQ13591 1074 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PTK2BQ14289 1009 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PRAMEF14Q5SWL7 426 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 C4orf22Q6V702 233 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 ATL2Q8NHH9 583 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 CCHCR1Q8TD31 782 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 FUBP1Q96AE4 644 aaKnown RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 C19orf43Q9BQ61 176 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 FICDQ9BVA6 458 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 FSD1LQ9BXM9 530 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 AP1M1Q9BXS5 423 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 CDH19Q9H159 772 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 ETNK1Q9HBU6 452 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 SMARCAL1Q9NZC9 954 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PAK5Q9P286 719 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 FEZ2Q9UHY8 353 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 CDV3Q9UKY7 258 aaKnown RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PNMA8BQ9ULN7 279 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-205ENST00000423941 NEU2Q9Y3R4 380 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 SAR1BQ9Y6B6 198 aa18.42■□□□□ 0.54
HDAC6-205ENST00000423941 PCNX2A6NKB5 2137 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 ERI2A8K979 691 aaKnown RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 SUN1O94901 812 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 ZSCAN5DPP0CG00 497 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 COILP38432 576 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 KIAA1024LP59773 190 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 PDE1CQ14123 709 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 NFATC4Q14934 902 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 HENMT1Q5T8I9 393 aaKnown RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 DENND2CQ68D51 928 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 MACC1Q6ZN28 852 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 NYAP1Q6ZVC0 841 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 PRUNE1Q86TP1 453 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 SLC25A41Q8N5S1 370 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 PDCD7Q8N8D1 485 aaKnown RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 DTX3LQ8TDB6 740 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 SAP25Q8TEE9 199 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 SCAMP4Q969E2 229 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 MAGOHBQ96A72 148 aaKnown RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 TBL1YQ9BQ87 522 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 LRRC40Q9H9A6 602 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 IL17CQ9P0M4 197 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 KLF15Q9UIH9 416 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 SHOC2Q9UQ13 582 aa18.41■□□□□ 0.54
HDAC6-205ENST00000423941 ZNF106Q9H2Y7 1883 aaKnown RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 ARID1BQ8NFD5 2236 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-205ENST00000423941 GOLGA6CA6NDK9 693 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GOLGA6BA6NDN3 693 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GOLGA8CPA6NN73 597 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 IFNB1P01574 187 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 CSF2P04141 144 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 PCCBP05166 539 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GOLGA6DP0CG33 693 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 NME1P15531 152 aaKnown RBP18.4■□□□□ 0.54
HDAC6-205ENST00000423941 ARRB1P49407 418 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-205ENST00000423941 CCT8P50990 548 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 ADAMTSL4Q6UY14 1074 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 PARGQ86W56 976 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms