RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 HEATR4Q86WZ0 1026 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 STARD8Q92502 1023 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 SCARF2Q96GP6 870 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 FZD10Q9ULW2 581 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 CREBBPQ92793 2442 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 ENO4A6NNW6 628 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 A8MX80 341 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 FGF10O15520 208 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 CREB3O43889 395 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 KRT7P08729 469 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 PRKCSHP14314 528 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 UCHL3P15374 230 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 AIF1P55008 147 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 CDK3Q00526 305 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 PTP4A2Q12974 167 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 WDR59Q6PJI9 974 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 WDR74Q6RFH5 385 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 TEX19Q8NA77 164 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 NUS1Q96E22 293 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 NSMCE3Q96MG7 304 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 CTRCQ99895 268 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 SUDS3Q9H7L9 328 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 B4GALT6Q9UBX8 382 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 NOCTQ9UK39 431 aaKnown RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 F8VZ95 297 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 K7EM74 188 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 PALMO75781 387 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 STK17BO94768 372 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 DLGAP3O95886 979 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 GPD1P21695 349 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 HTR7P34969 479 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 CDR2Q01850 454 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 MAP7Q14244 749 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 C16orf46Q6P387 395 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 KDELC2Q7Z4H8 507 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 OR10G6Q8NH81 332 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 SLC30A5Q8TAD4 765 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 AHCYL2Q96HN2 611 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 C11orf70Q9BRQ4 267 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 SLC39A8Q9C0K1 460 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 PRDM8Q9NQV8 689 aa16.69■□□□□ 0.26
CHCHD3-202ENST00000423635 MKRN2OSH3BPM6 223 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 UNGP13051 313 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 CHRNB2P17787 502 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 NR1D1P20393 614 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 ACTR1BP42025 376 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 STAT5AP42229 794 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 POLD2P49005 469 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 PAPOLAP51003 745 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 ACTR1AP61163 376 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 FMO1Q01740 532 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 RFTN1Q14699 578 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 CNGA3Q16281 694 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 ATP1A1-AS1Q5TC04 95 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 FHL5Q5TD97 284 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 SCYL2Q6P3W7 929 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 CCDC13Q8IYE1 715 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 ESX1Q8N693 406 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 SLC20A1Q8WUM9 679 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 DTD2Q96FN9 168 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 SLC38A3Q99624 504 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 APMAPQ9HDC9 416 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 PLEKHM1Q9Y4G2 1056 aa16.68■□□□□ 0.26
CHCHD3-202ENST00000423635 ITPR2Q14571 2701 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 ARHGAP42A6NI28 874 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 SIGLEC16A6NMB1 481 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 A8MU76 341 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 HTRA2O43464 458 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 VPS4BO75351 444 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 HEXIM1O94992 359 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 AGFG2O95081 481 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 F8A1P23610 371 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 SCNN1BP51168 640 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 ZNF143P52747 638 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 COPB1P53618 953 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 SFRP1Q8N474 314 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 GALNT11Q8NCW6 608 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 CELF6Q96J87 481 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 TUBGCP2Q9BSJ2 902 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 SELENOOQ9BVL4 669 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 CINPQ9BW66 212 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 KIAA1468Q9P260 1216 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 VPS4AQ9UN37 437 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 PCDHB3Q9Y5E6 796 aa16.67■□□□□ 0.26
CHCHD3-202ENST00000423635 PSMD11O00231 422 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 CCP110O43303 1012 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 VIPR1P32241 457 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 ETV3P41162 512 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 UQCRFS1P47985 274 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 AP1S1P61966 158 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 DPTQ07507 201 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms