RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TPRG1LQ5T0D9 272 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 RAET1GQ6H3X3 334 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 CRTC1Q6UUV9 634 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 KDM7AQ6ZMT4 941 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 PID1Q7Z2X4 250 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 HSD11B1LQ7Z5J1 315 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 RAB44Q7Z6P3 723 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 TSPAN33Q86UF1 283 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 SLCO6A1Q86UG4 719 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 CDKL3Q8IVW4 592 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 FSTL5Q8N475 847 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 CHCHD4Q8N4Q1 142 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 PLA2G15Q8NCC3 412 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 SCG3Q8WXD2 468 aaKnown RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 AP2M1Q96CW1 435 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 IMP4Q96G21 291 aaKnown RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 TBATAQ96M53 351 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 ALS2CR12Q96Q35 445 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 SRPK1Q96SB4 655 aaKnown RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 SCNM1Q9BWG6 230 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 GRPEL1Q9HAV7 217 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 NCKIPSDQ9NZQ3 722 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 MOSPD1Q9UJG1 213 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 TRHDEQ9UKU6 1024 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 PRLP01236 227 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 TNFP01375 233 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ANXA6P08133 673 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 MMP2P08253 660 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 PYGMP11217 842 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 MYCLP1P12525 358 aaPredicted RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 GM2AP17900 193 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 TRIM23P36406 574 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 GPR1P46091 355 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 HK3P52790 923 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 EIF3EP60228 445 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 OTUD4Q01804 1114 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 DNAJC3Q13217 504 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ILKQ13418 452 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 GALNT3Q14435 633 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 QPCTQ16769 361 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ZCCHC8Q6NZY4 707 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 Q6ZVL8 140 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 KDELC2Q7Z4H8 507 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 LRRC8AQ8IWT6 810 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 RAVER1Q8IY67 606 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 NRSN1Q8IZ57 195 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 RBFAQ8N0V3 343 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 GALNT15Q8N3T1 639 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 OR56A4Q8NGH8 313 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ACTL9Q8TC94 416 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ALG3Q92685 438 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 ANP32BQ92688 251 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 GLMNQ92990 594 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 TSACCQ96A04 125 aaPredicted RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 FUBP1Q96AE4 644 aaKnown RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 LYSMD1Q96S90 227 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 USP29Q9HBJ7 922 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 PKD2L2Q9NZM6 624 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 FAM153AQ9UHL3 310 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 RSPH14Q9UHP6 348 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 KLF15Q9UIH9 416 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 PACSIN2Q9UNF0 486 aaPredicted RBP10.93□□□□□ -0.66
USP49-204ENST00000423567 NEUROG3Q9Y4Z2 214 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 TMEM131Q92545 1883 aa10.93□□□□□ -0.66
USP49-204ENST00000423567 SHROOM3Q8TF72 1996 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 A0A0U1RQJ8 604 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 RGSL1A5PLK6 1076 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 K7ESM1 405 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 TRIM38O00635 465 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 TPP1O14773 563 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 TNFRSF10CO14798 259 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 PMPCBO75439 489 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 CLDN7O95471 211 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 NDST3O95803 873 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 MT-CYBP00156 380 aaPredicted RBP10.92□□□□□ -0.66
USP49-204ENST00000423567 RBP3P10745 1247 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 NFKB1P19838 968 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 SPINK2P20155 84 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 TEAD1P28347 426 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 RBL1P28749 1068 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 RPIAP49247 311 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 ACADVLP49748 655 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 STC1P52823 247 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 PTSQ03393 145 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 DPTQ07507 201 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 WASHC5Q12768 1159 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 C1orf61Q13536 156 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 IHHQ14623 411 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 PTPRRQ15256 657 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 ALG11Q2TAA5 492 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 DEFB133Q30KQ1 61 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 SEL1L2Q5TEA6 688 aa10.92□□□□□ -0.66
USP49-204ENST00000423567 DARS2Q6PI48 645 aaKnown RBP10.92□□□□□ -0.66
USP49-204ENST00000423567 ZNF765Q7L2R6 523 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms