RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CYP4F12Q9HCS2 524 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 LUC7LQ9NQ29 371 aaKnown RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 RBM22Q9NW64 420 aaKnown RBP eCLIP15.18■□□□□ 0.02
USB1-202ENST00000423271 SATB2Q9UPW6 733 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 BPTFQ12830 3046 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 PRSS38A1L453 326 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 GOLGA6CA6NDK9 693 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 GOLGA6BA6NDN3 693 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 PSMD11O00231 422 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TNFRSF10CO14798 259 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TCEA3O75764 348 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 GOLGA6DP0CG33 693 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 KDELR1P24390 212 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 CCNCP24863 283 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 NFKBIAP25963 317 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 LSSP48449 732 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 NIPAL4Q0D2K0 466 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 CCDC173Q0VFZ6 552 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 ARHGEF7Q14155 803 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 SPIDRQ14159 915 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TCEAL1Q15170 157 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 LRRC66Q68CR7 880 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 RAET1GQ6H3X3 334 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TIGD7Q6NT04 549 aaPredicted RBP15.17■□□□□ 0.02
USB1-202ENST00000423271 LRRC69Q6ZNQ3 347 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TAF8Q7Z7C8 310 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 MAP7D3Q8IWC1 876 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 SDR16C5Q8N3Y7 309 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 GPR156Q8NFN8 814 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 DESI2Q9BSY9 194 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 TDRD1Q9BXT4 1180 aaKnown RBP15.17■□□□□ 0.02
USB1-202ENST00000423271 TEX101Q9BY14 249 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 ASCL3Q9NQ33 180 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 PHPT1Q9NRX4 125 aaPredicted RBP15.17■□□□□ 0.02
USB1-202ENST00000423271 GOLGA6AQ9NYA3 693 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 DTLQ9NZJ0 730 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 CD84Q9UIB8 345 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 PPIL1Q9Y3C6 166 aa15.17■□□□□ 0.02
USB1-202ENST00000423271 A0A0J9YYE9 177 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 LRRD1A4D1F6 860 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 B4DGG1 531 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 NTN3O00634 580 aaPredicted RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 RRP8O43159 456 aaKnown RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 NOBOXO60393 691 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 DXOO77932 396 aaKnown RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 TRBC1P01850 177 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 FUCA1P04066 466 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 CEACAM5P06731 702 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 CCNB1P14635 433 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 CCL7P80098 99 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 CDK3Q00526 305 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 TECPR1Q7Z6L1 1165 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 FAM46DQ8NEK8 389 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 FATE1Q969F0 183 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 HDAC11Q96DB2 347 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 NAF1Q96HR8 494 aaKnown RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 HIC2Q96JB3 615 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 ZNF578Q96N58 590 aaPredicted RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 FRMD8Q9BZ67 464 aaPredicted RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 CARS2Q9HA77 564 aaKnown RBP15.16■□□□□ 0.02
USB1-202ENST00000423271 CHKBQ9Y259 395 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 UNC13CQ8NB66 2214 aa15.16■□□□□ 0.02
USB1-202ENST00000423271 A0A0A6YYK5 440 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 A0A1W2PQM1 296 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 KCNK1O00180 336 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 SOD1P00441 154 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 PRLP01236 227 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 RPLP0P05388 317 aaKnown RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 MX2P20592 715 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 ARHGAP25P42331 645 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 POLD2P49005 469 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 VAV2P52735 878 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 EPHB1P54762 984 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 HADHBP55084 474 aaKnown RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 PCBP4P57723 403 aaKnown RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 ZBTB17Q13105 803 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 GSE1Q14687 1217 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 SOWAHCQ53LP3 525 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 OGFOD3Q6PK18 319 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 DOK6Q6PKX4 331 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 B3GNT8Q7Z7M8 397 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 KIAA1328Q86T90 577 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 NRROSQ86YC3 692 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 LRRC8AQ8IWT6 810 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 SPACA3Q8IXA5 215 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 CCDC13Q8IYE1 715 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 CCNYQ8ND76 341 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 WDR48Q8TAF3 677 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
USB1-202ENST00000423271 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 BBC3Q96PG8 261 aaPredicted RBP15.15■□□□□ 0.02
USB1-202ENST00000423271 LGMNQ99538 433 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms