RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC7A5P1Q8MH63 180 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 VPS33AQ96AX1 596 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 SH3YL1Q96HL8 342 aaPredicted RBP16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 KCNA7Q96RP8 456 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 GPN2Q9H9Y4 310 aaPredicted RBP16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 GPRC5DQ9NZD1 345 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 NDUFAF1Q9Y375 327 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 LRRC14BA6NHZ5 514 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 TOR1BO14657 336 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 NCAM2O15394 837 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 XYLBO75191 536 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 GPIP06744 558 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 LTA4HP09960 611 aaKnown RBP16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 ATP4BP51164 291 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 KPNA2P52292 529 aaKnown RBP16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 IFITM3Q01628 133 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 AGAP9Q5VTM2 703 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 SFRP1Q8N474 314 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 TMEM74Q96NL1 305 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 ADNPQ9H2P0 1102 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 SMARCAD1Q9H4L7 1026 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 ATAD3AQ9NVI7 634 aa16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.67■□□□□ 0.26
NPC1L1-203ENST00000423141 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 KPNA4O00629 521 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PIP5K1BO14986 540 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 TCF3P15923 654 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 BAG6P46379 1132 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 POLD2P49005 469 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 RAD23AP54725 363 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 BROXQ5VW32 411 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 TMEM207Q6UWW9 146 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 LINC00523Q86TU6 105 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PPHLN1Q8NEY8 458 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 CASP10Q92851 521 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 HPS1Q92902 700 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 TMEM125Q96AQ2 219 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 DGCR6LQ9BY27 220 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ALG2Q9H553 416 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PCDH12Q9NPG4 1184 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 INTS10Q9NVR2 710 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 SLAMF8Q9P0V8 285 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 DNMT3BQ9UBC3 853 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 WARS2Q9UGM6 360 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 GIT1Q9Y2X7 761 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 LTBP4Q8N2S1 1624 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 BCAS1O75363 584 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 LDLRP01130 860 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ALBP02768 609 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 JUNBP17275 347 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 TKTL1P51854 596 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 UNC50Q53HI1 259 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ZNF678Q5SXM1 525 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PRMT9Q6P2P2 845 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC2A7Q6PXP3 512 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 LDB1Q86U70 411 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 MIER2Q8N344 545 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PDPRQ8NCN5 879 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 CCDC126Q96EE4 140 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC2A13Q96QE2 648 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ZNF347Q96SE7 839 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 MPHOSPH6Q99547 160 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 MROQ9BYG7 248 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 YTHDF1Q9BYJ9 559 aaKnown RBP16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ING2Q9H160 280 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 ANAPC2Q9UJX6 822 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 GINS2Q9Y248 185 aa16.66■□□□□ 0.26
NPC1L1-203ENST00000423141 YJEFN3A6XGL0 299 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 MTSS1O43312 755 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 PMPCBO75439 489 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 JRKO75564 520 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 SIX3O95343 332 aaPredicted RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 FCGR1AP12314 374 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 IMPDH1P20839 514 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 EEF1DP29692 281 aaKnown RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 LIPEQ05469 1076 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 DNASE1L3Q13609 305 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 GEN1Q17RS7 908 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 GPR158Q5T848 1215 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 NEPROQ6NW34 567 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 PHYKPLQ8IUZ5 450 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 SCAIQ8N9R8 606 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC22A17Q8WUG5 538 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 TEX37Q96LM6 180 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 CAMKK2Q96RR4 588 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 KCTD14Q9BQ13 255 aaPredicted RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 FUNDC2Q9BWH2 189 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 EIF2AQ9BY44 585 aaKnown RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 GOLGA2P5Q9HBQ8 144 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms