RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 TBC1D3EA0A087X179 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3KA0A087X1G2 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3FA6NER0 549 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3LB9A6J9 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 KPNA5O15131 536 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3HP0C7X1 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 HOXB2P14652 356 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 GKP32189 559 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 VIPR1P32241 457 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CTSOP43234 321 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 SMAD4Q13485 552 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3GQ6DHY5 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3CQ6IPX1 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 PARM1Q6UWI2 310 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 MYLK4Q86YV6 388 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3Q8IZP1 549 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 AP2M1Q96CW1 435 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 MYEOVQ96EZ4 313 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CPEB1Q9BZB8 566 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 SNX15Q9NRS6 342 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 INTS10Q9NVR2 710 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 MYO18AQ92614 2054 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 A0A0J9YYE9 177 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 LOC285095A0A1B0GVY8 99 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CCDC162PA2VCL2 907 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TCP11X1B4DZS4 312 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CCL22O00626 93 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 PHGDHO43175 533 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 ATG13O75143 517 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TRBC1P01850 177 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CPA3P15088 417 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 DRD1P21728 446 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 LSP1P33241 339 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 SUOXP51687 545 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 PTPN5P54829 565 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 IL2P60568 153 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 LRRC32Q14392 662 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 UBXN2BQ14CS0 331 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 N4BP2L1Q5TBK1 243 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 TMEM184AQ6ZMB5 413 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 SPATS2Q86XZ4 545 aaKnown RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 FAM217AQ8IXS0 508 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 HDDC3Q8N4P3 179 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 RAB42Q8N4Z0 105 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 OR14C36Q8NHC7 312 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 WFDC5Q8TCV5 224 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 SIPA1Q96FS4 1042 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 PHF7Q9BWX1 381 aaPredicted RBP7.4□□□□□ -1.22
BDNF-209ENST00000420794 TXLNGYQ9BZA5 131 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 C16orf96A6NNT2 1141 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 SUPT3HB4E1H0 165 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 SUPT3HO75486 399 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 GPC4O75487 556 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 SLC25A14O95258 325 aaPredicted RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 PKMP14618 531 aaKnown RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 PTGER3P43115 390 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 GLRBP48167 497 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 DBN1Q16643 649 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 HNRNPA1L2Q32P51 320 aaKnown RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 TEDDM1Q5T9Z0 273 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 STEAP4Q687X5 459 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 KCTD11Q693B1 232 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 VITQ6UXI7 678 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 RALGPS2Q86X27 583 aaPredicted RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 SLC41A1Q8IVJ1 513 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 RAB7BQ96AH8 199 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 TMEM159Q96B96 161 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 AGAP2Q99490 1192 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 LHX3Q9UBR4 397 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.23
BDNF-209ENST00000420794 SLC27A6Q9Y2P4 619 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 MTCH2Q9Y6C9 303 aa7.4□□□□□ -1.23
BDNF-209ENST00000420794 CXorf51AA0A1B0GTR3 108 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 WNT9AO14904 365 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 MAP3K13O43283 966 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 H2AFYO75367 372 aaKnown RBP7.39□□□□□ -1.23
BDNF-209ENST00000420794 FAM155BO75949 473 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 CLDN7O95471 211 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 ADH1BP00325 375 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 PRKCGP05129 697 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 LTA4HP09960 611 aaKnown RBP7.39□□□□□ -1.23
BDNF-209ENST00000420794 LINC00271P0C7V0 271 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 DGKAP23743 735 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 NTSR1P30989 418 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 SLC6A11P48066 632 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 ZNF234Q14588 700 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 NXNQ6DKJ4 435 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
BDNF-209ENST00000420794 FSTL4Q6MZW2 842 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 LRRC8EQ6NSJ5 796 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
BDNF-209ENST00000420794 SNX20Q7Z614 316 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms