RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 YKT6O15498 198 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 CLDN7O95471 211 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 FGF1P05230 155 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 HOXC4P09017 264 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-204ENST00000418628 EPHA8P29322 1005 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-204ENST00000418628 CCT8P50990 548 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 KIAA1024LP59773 190 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 LONRF2Q1L5Z9 754 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 PARP6Q2NL67 630 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 MACC1Q6ZN28 852 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 ARHGEF18Q6ZSZ5 1173 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 LYSMD3Q7Z3D4 306 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 GLIS1Q8NBF1 620 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 MS4A14Q96JA4 679 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 SRPK1Q96SB4 655 aaKnown RBP18.63■□□□□ 0.57
PTCD3-204ENST00000418628 ARNT2Q9HBZ2 717 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 TM7SF3Q9NS93 570 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 PNMA8BQ9ULN7 279 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-204ENST00000418628 COL27A1Q8IZC6 1860 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-204ENST00000418628 PGRMC1O00264 195 aaKnown RBP18.62■□□□□ 0.57
PTCD3-204ENST00000418628 PCCBP05166 539 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 TSHRP16473 764 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 GNG11P61952 73 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 OLIG2Q13516 323 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 SNX1Q13596 522 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 PDE1CQ14123 709 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-204ENST00000418628 INPP5AQ14642 412 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 HENMT1Q5T8I9 393 aaKnown RBP18.62■□□□□ 0.57
PTCD3-204ENST00000418628 DENND5AQ6IQ26 1287 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 PNCKQ6P2M8 343 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 KDELC2Q7Z4H8 507 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 TMC3Q7Z5M5 1100 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 PARGQ86W56 976 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 NRSN1Q8IZ57 195 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-204ENST00000418628 TTC30BQ8N4P2 665 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 BAHD1Q8TBE0 780 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-204ENST00000418628 SAP25Q8TEE9 199 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 APOOQ9BUR5 198 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 ABCG8Q9H221 673 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 HOMER3Q9NSC5 361 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 ZNF148Q9UQR1 794 aa18.62■□□□□ 0.57
PTCD3-204ENST00000418628 RGSL1A5PLK6 1076 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 PIRTP0C851 137 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 NME1P15531 152 aaKnown RBP18.61■□□□□ 0.57
PTCD3-204ENST00000418628 TCP1P17987 556 aaKnown RBP18.61■□□□□ 0.57
PTCD3-204ENST00000418628 SPINT3P49223 89 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 DCDC1P59894 354 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 EIF2B5Q13144 721 aaKnown RBP18.61■□□□□ 0.57
PTCD3-204ENST00000418628 NFATC4Q14934 902 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 FUBP1Q96AE4 644 aaKnown RBP18.61■□□□□ 0.57
PTCD3-204ENST00000418628 NAPGQ99747 312 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-204ENST00000418628 FICDQ9BVA6 458 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 FSD1LQ9BXM9 530 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 TEX101Q9BY14 249 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 TRABDQ9H4I3 376 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 ZFYVE1Q9HBF4 777 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 SMARCAL1Q9NZC9 954 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 HACD3Q9P035 362 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 KLF15Q9UIH9 416 aa18.61■□□□□ 0.57
PTCD3-204ENST00000418628 AURKAO14965 403 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 ZNF185O15231 689 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 CBFA2T3O75081 653 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 AP2A1O95782 977 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 AGTP01019 485 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 CSF2P04141 144 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 CSRP1P21291 193 aaKnown RBP18.6■□□□□ 0.57
PTCD3-204ENST00000418628 HMGCLP35914 325 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 ARRB1P49407 418 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-204ENST00000418628 SEMA5AQ13591 1074 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 PRPSAP1Q14558 356 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTCD3-204ENST00000418628 PRAMEF14Q5SWL7 426 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 DENND2CQ68D51 928 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 TTC27Q6P3X3 843 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 SCAMP4Q969E2 229 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 TBATAQ96M53 351 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 NAP1L3Q99457 506 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-204ENST00000418628 CAAP1Q9H8G2 361 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 OR1A2Q9Y585 309 aa18.6■□□□□ 0.57
PTCD3-204ENST00000418628 ERI2A8K979 691 aaKnown RBP18.59■□□□□ 0.57
PTCD3-204ENST00000418628 FLRT2O43155 660 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 MYCLP1P12525 358 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-204ENST00000418628 ETS1P14921 441 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 FDFT1P37268 417 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 KCNJ1P48048 391 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 PTK2BQ14289 1009 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 UAP1L1Q3KQV9 507 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 FAXCQ5TGI0 409 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 CCDC70Q6NSX1 233 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 ADAMTSL4Q6UY14 1074 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 PRUNE1Q86TP1 453 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 SLC25A41Q8N5S1 370 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 CCHCR1Q8TD31 782 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 AP2M1Q96CW1 435 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 TBL1YQ9BQ87 522 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 CDH19Q9H159 772 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 WDR26Q9H7D7 661 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 LRRC40Q9H9A6 602 aa18.59■□□□□ 0.57
PTCD3-204ENST00000418628 PKD2L2Q9NZM6 624 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms