RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MAML1Q92585 1016 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 PRR11Q96HE9 360 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-208ENST00000417285 LRRN3Q9H3W5 708 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 DPEP2Q9H4A9 486 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 NHEJ1Q9H9Q4 299 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-208ENST00000417285 RABGEF1Q9UJ41 708 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 ANKRD36A6QL64 1941 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 FZD6O60353 706 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 RPLP0P05388 317 aaKnown RBP25.3■■□□□ 1.64
VEGFA-208ENST00000417285 CEACAM5P06731 702 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 MX2P20592 715 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 PEX6Q13608 980 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 C14orf28Q4W4Y0 310 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 ALG1LQ6GMV1 187 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 Q6ZVL8 140 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 NLRP8Q86W28 1048 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 HEATR4Q86WZ0 1026 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 CNGA4Q8IV77 575 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 PELI3Q8N2H9 469 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 KIAA1524Q8TCG1 905 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 GPBAR1Q8TDU6 330 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 NAF1Q96HR8 494 aaKnown RBP25.3■■□□□ 1.64
VEGFA-208ENST00000417285 TMEM74Q96NL1 305 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 CHP1Q99653 195 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 CARS2Q9HA77 564 aaKnown RBP25.3■■□□□ 1.64
VEGFA-208ENST00000417285 TRNAU1APQ9NX07 287 aaKnown RBP25.3■■□□□ 1.64
VEGFA-208ENST00000417285 MGAQ8IWI9 3026 aa25.3■■□□□ 1.64
VEGFA-208ENST00000417285 NUDT21O43809 227 aaKnown RBP25.29■■□□□ 1.64
VEGFA-208ENST00000417285 NOBOXO60393 691 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 TNFSF15O95150 251 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 CA4P22748 312 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 LHCGRP22888 699 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 ILF3Q12906 894 aaKnown RBP eCLIP25.29■■□□□ 1.64
VEGFA-208ENST00000417285 MESDQ14696 234 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 TECPR1Q7Z6L1 1165 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 SLC35G2Q8TBE7 412 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 FAF2Q96CS3 445 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 GSDMCQ9BYG8 508 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 RBM22Q9NW64 420 aaKnown RBP eCLIP25.29■■□□□ 1.644e-11■■■■□ 26.1
VEGFA-208ENST00000417285 LRIT1Q9P2V4 623 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 DNPEPQ9ULA0 475 aa25.29■■□□□ 1.64
VEGFA-208ENST00000417285 A0A1W2PQM1 296 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CDRT15L2A8MXV6 281 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 D6RAR5 112 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 KLK10O43240 276 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 ITGA2BP08514 1039 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 PDHA1P08559 390 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CCNB1P14635 433 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 ZNF30P17039 623 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 ARHGAP25P42331 645 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 PDX1P52945 283 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 EPHB1P54762 984 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 INHBCP55103 352 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 TMPRSS3P57727 454 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CXADRP78310 365 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CDK3Q00526 305 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 HLTFQ14527 1009 aaKnown RBP eCLIP25.28■■□□□ 1.646e-8■■□□□ 12.7
VEGFA-208ENST00000417285 FOXR1Q6PIV2 292 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CLEC14AQ86T13 490 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 CCNJLQ8IV13 435 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 RHOT2Q8IXI1 618 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 RAVER1Q8IY67 606 aaKnown RBP25.28■■□□□ 1.64
VEGFA-208ENST00000417285 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 FRMD8Q9BZ67 464 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-208ENST00000417285 SPTLC3Q9NUV7 552 aa25.28■■□□□ 1.64
VEGFA-208ENST00000417285 A0A0J9YYE9 177 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 PLD2O14939 933 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 CASC3O15234 703 aaKnown RBP25.27■■□□□ 1.64
VEGFA-208ENST00000417285 ATXN7O15265 892 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-208ENST00000417285 ZW10O43264 779 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 TRBC1P01850 177 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 PYGLP06737 847 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 CTPS1P17812 591 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 CCKBRP32239 447 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 RPL26P61254 145 aaKnown RBP25.27■■□□□ 1.64
VEGFA-208ENST00000417285 SKOR1P84550 965 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 RAET1GQ6H3X3 334 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 ZNF765Q7L2R6 523 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 RAB11FIP2Q7L804 512 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 TSPAN33Q86UF1 283 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 FBXO39Q8N4B4 442 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 Q8N9G6 341 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-208ENST00000417285 CCL4L1Q8NHW4 92 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 RPL26L1Q9UNX3 145 aaKnown RBP25.27■■□□□ 1.64
VEGFA-208ENST00000417285 SLC17A4Q9Y2C5 497 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 SSUH2Q9Y2M2 353 aa25.27■■□□□ 1.64
VEGFA-208ENST00000417285 GOLGA6CA6NDK9 693 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 GOLGA6BA6NDN3 693 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 B4DGG1 531 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 AKR1B15C9JRZ8 316 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-208ENST00000417285 MAP3K6O95382 1288 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 GOLGA6DP0CG33 693 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 KDELR1P24390 212 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 GPR1P46091 355 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 PTSQ03393 145 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 NRSN1Q8IZ57 195 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 TMEM159Q96B96 161 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 AP2M1Q96CW1 435 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 ZNF830Q96NB3 372 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-208ENST00000417285 EPB41L5Q9HCM4 733 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms