RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 UNC5AQ6ZN44 842 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 Q6ZVL8 140 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 USP30Q70CQ3 517 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 CENPUQ71F23 418 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 TMC3Q7Z5M5 1100 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 C1orf210Q8IVY1 113 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 ZBED8Q8IZ13 594 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 PDIK1LQ8N165 341 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 GPR161Q8N6U8 529 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 GPR26Q8NDV2 337 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 OR4K2Q8NGD2 314 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 OR13J1Q8NGT2 312 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 UHMK1Q8TAS1 419 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 HCAR2Q8TDS4 363 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 AENQ8WTP8 325 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 SCAMP4Q969E2 229 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 FUBP1Q96AE4 644 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 ZNF669Q96BR6 464 aaPredicted RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 STAMBPL1Q96FJ0 436 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 COQ10AQ96MF6 247 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 AGAP2Q99490 1192 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 EBNA1BP2Q99848 306 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 GPR174Q9BXC1 333 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 TXLNGYQ9BZA5 131 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 GPR63Q9BZJ6 419 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 EPB41L4BQ9H329 900 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 CDC42EP4Q9H3Q1 356 aaKnown RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 SUDS3Q9H7L9 328 aaPredicted RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 EBF2Q9HAK2 575 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 ZFYVE1Q9HBF4 777 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 MAGEE1Q9HCI5 957 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 FZD3Q9NPG1 666 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 TREX1Q9NSU2 369 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 WSB2Q9NYS7 404 aaPredicted RBP8.06□□□□□ -1.12
MDC1-203ENST00000417033 NINJ2Q9NZG7 142 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 BFARQ9NZS9 450 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 IL17CQ9P0M4 197 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 RAB21Q9UL25 225 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 FZD4Q9ULV1 537 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 SCN8AQ9UQD0 1980 aa8.06□□□□□ -1.12
MDC1-203ENST00000417033 EML5Q05BV3 1969 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3DA0A087WVF3 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3IA0A087WXS9 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3EA0A087X179 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3KA0A087X1G2 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ZCWPW2A0A1B0GU75 182 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 A0A1W2PQ67 120 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 HEATR9A2RTY3 570 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 CCDC162PA2VCL2 907 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3FA6NER0 549 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 MROH6A6NGR9 719 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 SDR42E2A6NKP2 422 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3LB9A6J9 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 GOLGA8KD6RF30 607 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 GOLGA8TH3BQL2 631 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 WNT9AO14904 365 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 SLC7A4O43246 635 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 AP1G1O43747 822 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 RECQL5O94762 991 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 SEMA4FO95754 770 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3HP0C7X1 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 LPOP22079 712 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 ADRA1DP25100 572 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 CD6P30203 668 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 SSTR1P30872 391 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 MAGEA4P43358 317 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 CDKN1CP49918 316 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 POLR2LP62875 67 aaKnown RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 SARNPP82979 210 aaKnown RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 XIAPP98170 497 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ELP6Q0PNE2 266 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ARHGEF7Q14155 803 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 CRYMQ14894 314 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.128e-9■■■■□ 20
MDC1-203ENST00000417033 ACOX1Q15067 660 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ZNF284Q2VY69 593 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TMEM259Q4ZIN3 620 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 PCID2Q5JVF3 399 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 STEAP4Q687X5 459 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3GQ6DHY5 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3CQ6IPX1 549 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TECPR1Q7Z6L1 1165 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 KBTBD6Q86V97 674 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBC1D3Q8IZP1 549 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 CAMKK1Q8N5S9 505 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 PPHLN1Q8NEY8 458 aaKnown RBP8.05□□□□□ -1.12
MDC1-203ENST00000417033 BRSK1Q8TDC3 778 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 CXorf40AQ8TE69 158 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 NAT14Q8WUY8 206 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 RAB7BQ96AH8 199 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 ZBTB9Q96C00 473 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 DTD2Q96FN9 168 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 TBATAQ96M53 351 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 RANBP9Q96S59 729 aa8.05□□□□□ -1.12
MDC1-203ENST00000417033 KIFC1Q9BW19 673 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms