RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 GLB1P16278 677 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 AK4P27144 223 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-202ENST00000416769 HTR1BP28222 390 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 RAD51Q06609 339 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 MTM1Q13496 603 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 MAP9Q49MG5 647 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 INO80DQ53TQ3 878 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-202ENST00000416769 NKAIN2Q5VXU1 208 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 LIPIQ6XZB0 460 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 NPWQ8N729 165 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 OR56A4Q8NGH8 313 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 CTNNBL1Q8WYA6 563 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-202ENST00000416769 ZNF653Q96CK0 615 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 MCEEQ96PE7 176 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 SLC39A8Q9C0K1 460 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 DPEP2Q9H4A9 486 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 LRRC19Q9H756 370 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
LINC00339-202ENST00000416769 PARVAQ9NVD7 372 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 APPL1Q9UKG1 709 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
LINC00339-202ENST00000416769 PLEKHM1Q9Y4G2 1056 aa12.93□□□□□ -0.34
LINC00339-202ENST00000416769 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-202ENST00000416769 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 PJA2O43164 708 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 ITGB2P05107 769 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 CSF2RBP32927 897 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 PAPOLAP51003 745 aaKnown RBP12.92□□□□□ -0.34
LINC00339-202ENST00000416769 VAV2P52735 878 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 KIAA1024LP59773 190 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 TLE1Q04724 770 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 MAMLD1Q13495 774 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 TCEAL1Q15170 157 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 EFHC2Q5JST6 749 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 ATG14Q6ZNE5 492 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 ZNF761Q86XN6 746 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-202ENST00000416769 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 SMIM14Q96QK8 99 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 PEBP4Q96S96 227 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 MYO1AQ9UBC5 1043 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
LINC00339-202ENST00000416769 IGHV5-10-1A0A0J9YXX1 117 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 PRSS38A1L453 326 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-202ENST00000416769 CCDC175P0C221 793 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 FGF3P11487 239 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ALDH4A1P30038 563 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 POLD2P49005 469 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ARHGEF7Q14155 803 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 AGERQ15109 404 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 PARP15Q460N3 678 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 PPP1R15BQ5SWA1 713 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ERAP2Q6P179 960 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 DNAJC24Q6P3W2 148 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 SRLQ86TD4 932 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ARHGAP12Q8IWW6 846 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 RHOT2Q8IXI1 618 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ARFGAP1Q8N6T3 406 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 ECHDC3Q96DC8 303 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 CCDC74BQ96LY2 380 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 CARS2Q9HA77 564 aaKnown RBP12.91□□□□□ -0.34
LINC00339-202ENST00000416769 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 B4GALT6Q9UBX8 382 aa12.91□□□□□ -0.34
LINC00339-202ENST00000416769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00339-202ENST00000416769 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-202ENST00000416769 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-202ENST00000416769 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-202ENST00000416769 ECEL1O95672 775 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 FGF1P05230 155 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 ELFN1P0C7U0 828 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 LIFP15018 202 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 CD1CP29017 333 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 ZNF143P52747 638 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-202ENST00000416769 YBEYP58557 167 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-202ENST00000416769 TPI1P60174 286 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 KIF5AQ12840 1032 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 ACOX1Q15067 660 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 IGFBP7Q16270 282 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 CNGA3Q16281 694 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 AFMIDQ63HM1 303 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 DENND2CQ68D51 928 aa12.9□□□□□ -0.34
LINC00339-202ENST00000416769 PNCKQ6P2M8 343 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms