RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CCL7P80098 99 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 SKOR1P84550 965 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TRIM14Q14142 442 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 PDK2Q15119 407 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 IFI16Q16666 785 aaKnown RBP15.08■□□□□ 0
UBXN4-203ENST00000416538 USP45Q70EL2 814 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TMPRSS9Q7Z410 1059 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TRIM74Q86UV6 250 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 CNTD1Q8N815 330 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 KCTD6Q8NC69 237 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 ATL2Q8NHH9 583 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 SLC35G2Q8TBE7 412 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 NSMCE1Q8WV22 266 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 GLMNQ92990 594 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 SCAMP4Q969E2 229 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 FATE1Q969F0 183 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 HDAC11Q96DB2 347 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 RNF157Q96PX1 679 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 AGAP2Q99490 1192 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 LGMNQ99538 433 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 FOXP3Q9BZS1 431 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 BRD8Q9H0E9 1235 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 ABCG8Q9H221 673 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TSPY26PQ9H489 355 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 RBM22Q9NW64 420 aaKnown RBP eCLIP15.08■□□□□ 0
UBXN4-203ENST00000416538 CHKBQ9Y259 395 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 HYOU1Q9Y4L1 999 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TTLL3Q9Y4R7 772 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 PCYT1BQ9Y5K3 369 aaPredicted RBP15.08■□□□□ 0
UBXN4-203ENST00000416538 SDK2Q58EX2 2172 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 LRRD1A4D1F6 860 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 CAPN8A6NHC0 703 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 KCNK1O00180 336 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 AKR1B10O60218 316 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 MTA2O94776 668 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 RPLP0P05388 317 aaKnown RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 TPM3P06753 285 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 KRT7P08729 469 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 PTMSP20962 102 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 CCNCP24863 283 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 AK4P27144 223 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 POLD2P49005 469 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 MAZP56270 477 aaKnown RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 PCBP4P57723 403 aaKnown RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 ITKQ08881 620 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 TBX2Q13207 712 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 COL9A2Q14055 689 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 SPIDRQ14159 915 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 HLTFQ14527 1009 aaKnown RBP eCLIP15.07■□□□□ 0
UBXN4-203ENST00000416538 CERCAMQ5T4B2 595 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 RAET1GQ6H3X3 334 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 OGFOD3Q6PK18 319 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 IGF2-ASQ6U949 168 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 NPNTQ6UXI9 565 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 TAF8Q7Z7C8 310 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 LRRC49Q8IUZ0 686 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 TPCN2Q8NHX9 752 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 PATE1Q8WXA2 126 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 ZNF578Q96N58 590 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 WDR24Q96S15 920 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 CEP41Q9BYV8 373 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 DEF6Q9H4E7 631 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 NHEJ1Q9H9Q4 299 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 CARS2Q9HA77 564 aaKnown RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 PHPT1Q9NRX4 125 aaPredicted RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 SPATS2LQ9NUQ6 558 aaKnown RBP15.07■□□□□ 0
UBXN4-203ENST00000416538 MOSPD1Q9UJG1 213 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 SUFUQ9UMX1 484 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 PLEKHM1Q9Y4G2 1056 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
UBXN4-203ENST00000416538 ZNF106Q9H2Y7 1883 aaKnown RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 GOLGA6CA6NDK9 693 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 GOLGA6BA6NDN3 693 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 CDRT15L2A8MXV6 281 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 CBFA2T2O43439 604 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 GOLGA6DP0CG33 693 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 CCNB1P14635 433 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 KELP23276 732 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 TEAD1P28347 426 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 STC1P52823 247 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 PTSQ03393 145 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 DPTQ07507 201 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 PPIDQ08752 370 aaKnown RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 ARHGEF7Q14155 803 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 C14orf28Q4W4Y0 310 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 SLC9A4Q6AI14 798 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 TIGD7Q6NT04 549 aaPredicted RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 DOK6Q6PKX4 331 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 SPRED1Q7Z699 444 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 C17orf82Q86X59 251 aaPredicted RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 CCNJLQ8IV13 435 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 CCDC13Q8IYE1 715 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 FAM46DQ8NEK8 389 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 LPCAT1Q8NF37 534 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 GPBAR1Q8TDU6 330 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 FCRL3Q96P31 734 aaPredicted RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 OLFM3Q96PB7 478 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 GOLPH3Q9H4A6 298 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 GOLGA6AQ9NYA3 693 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms