RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CD84Q9UIB8 345 aa19.3■□□□□ 0.68
UBXN4-202ENST00000415164 PLEKHM1Q9Y4G2 1056 aa19.3■□□□□ 0.68
UBXN4-202ENST00000415164 UNC13CQ8NB66 2214 aa19.3■□□□□ 0.68
UBXN4-202ENST00000415164 TRBV23OR9-2A0A075B6M9 112 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 FUCA1P04066 466 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ITGB6P18564 788 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 CSTF2P33240 577 aaKnown RBP eCLIP19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ACTR1BP42025 376 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 GPR1P46091 355 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ACTR1AP61163 376 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 CLCA4Q14CN2 919 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 SMTNL2Q2TAL5 461 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ZNF574Q6ZN55 896 aaPredicted RBP19.29■□□□□ 0.68
UBXN4-202ENST00000415164 Q6ZVL8 140 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 FAM129CQ86XR2 697 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 NRSN1Q8IZ57 195 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 FNIP1Q8TF40 1166 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 NSMCE1Q8WV22 266 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 HSPH1Q92598 858 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ART4Q93070 314 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ZNF653Q96CK0 615 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 TAAR9Q96RI9 348 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 ERGIC2Q96RQ1 377 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 TEX101Q9BY14 249 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 FRMD8Q9BZ67 464 aaPredicted RBP19.29■□□□□ 0.68
UBXN4-202ENST00000415164 NOD2Q9HC29 1040 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 TRNAU1APQ9NX07 287 aaKnown RBP19.29■□□□□ 0.68
UBXN4-202ENST00000415164 KCNK4Q9NYG8 393 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 CNOT8Q9UFF9 292 aaKnown RBP19.29■□□□□ 0.68
UBXN4-202ENST00000415164 TMEM98Q9Y2Y6 226 aa19.29■□□□□ 0.68
UBXN4-202ENST00000415164 A0A0U1RQS6 177 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 NPIPB15A6NHN6 443 aaPredicted RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 H3BRJ5 948 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 HGSO14964 777 aaPredicted RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 SOCS5O75159 536 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 FGF3P11487 239 aaPredicted RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 LHCGRP22888 699 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 AMPD1P23109 780 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 CD1CP29017 333 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ADCY8P40145 1251 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ARL4AP40617 200 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 TRAF2Q12933 501 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ASIC2Q16515 512 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 SNAP47Q5SQN1 464 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 PLEKHA7Q6IQ23 1121 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 PPP1R2P3Q6NXS1 205 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 TSPAN33Q86UF1 283 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 TRIM74Q86UV6 250 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ZNF761Q86XN6 746 aaPredicted RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 PTRH1Q86Y79 214 aaKnown RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ATPAF2Q8N5M1 289 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 LZTR1Q8N653 840 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 AHCYL2Q96HN2 611 aaKnown RBP19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ZNF599Q96NL3 588 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 NUDCD1Q96RS6 583 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 CDH19Q9H159 772 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 ANO10Q9NW15 660 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 PHTF1Q9UMS5 762 aa19.28■□□□□ 0.68
UBXN4-202ENST00000415164 SCN8AQ9UQD0 1980 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 A0A1W2PQ67 120 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 TMEM191CA6NGB0 347 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 EFCAB7A8K855 629 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 TERTO14746 1132 aaKnown RBP19.27■□□□□ 0.68
UBXN4-202ENST00000415164 PPM1DO15297 605 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 LIMK2P53671 638 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 ITKQ08881 620 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 PEX6Q13608 980 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 DPYSQ14117 519 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 STX1AQ16623 288 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 ARMC12Q5T9G4 340 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 TMCO3Q6UWJ1 677 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 USP45Q70EL2 814 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 ZNF438Q7Z4V0 828 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 IRF2BP2Q7Z5L9 587 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 NAGSQ8N159 534 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 PGBD5Q8N414 524 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 AGBL5Q8NDL9 886 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 SLC25A18Q9H1K4 315 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 ETNK2Q9NVF9 386 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 KCTD5Q9NXV2 234 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 SLC39A1Q9NY26 324 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 TMEM9Q9P0T7 183 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 B3GALT1Q9Y5Z6 326 aa19.27■□□□□ 0.68
UBXN4-202ENST00000415164 LRRC53A6NM62 1247 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 A8MU76 341 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 SUV39H1O43463 412 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 HTRA2O43464 458 aaPredicted RBP19.26■□□□□ 0.67
UBXN4-202ENST00000415164 LRCH4O75427 683 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 FTLP02792 175 aaPredicted RBP19.26■□□□□ 0.67
UBXN4-202ENST00000415164 LIFP15018 202 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 HSPA9P38646 679 aaKnown RBP19.26■□□□□ 0.67
UBXN4-202ENST00000415164 GPR3P46089 330 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 BORAQ6PGQ7 559 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 CYP4V2Q6ZWL3 525 aaPredicted RBP19.26■□□□□ 0.67
UBXN4-202ENST00000415164 C17orf82Q86X59 251 aaPredicted RBP19.26■□□□□ 0.67
UBXN4-202ENST00000415164 CACNA2D3Q8IZS8 1091 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 OR4D9Q8NGE8 314 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 NKD1Q969G9 470 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 OR2M4Q96R27 311 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms