RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TIGD5Q53EQ6 642 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 UNC50Q53HI1 259 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 NOMO2Q5JPE7 1267 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CLEC6AQ6EIG7 209 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 DHRS4L2Q6PKH6 230 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CHST15Q7LFX5 561 aaPredicted RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 RETREG3Q86VR2 466 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CROCCP3Q8IVE0 287 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PEX13Q92968 403 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PPWD1Q96BP3 646 aaKnown RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 C12orf43Q96C57 262 aaKnown RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 ISOC1Q96CN7 298 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PHF21BQ96EK2 531 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PKMYT1Q99640 499 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 SMOXQ9NWM0 555 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 GID8Q9NWU2 228 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MIOSQ9NXC5 875 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 Q9Y3F1 56 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 A0A087WXM4 84 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 TRIM64A6NGJ6 449 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 E9PAM4 449 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 SUPT3HO75486 399 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 SUPT7LO94864 414 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 CHRM3P20309 590 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MYF6P23409 242 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MRPL19P49406 292 aaKnown RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 CCR3P51677 355 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 SLC7A2P52569 658 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MLLT6P55198 1093 aaPredicted RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 NAA20P61599 178 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 TAF2Q6P1X5 1199 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 RAB44Q7Z6P3 723 aaPredicted RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 TLK2Q86UE8 772 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 UMODL1-AS1Q8N2C9 162 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 BBS5Q8N3I7 341 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 C3orf58Q8NDZ4 430 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 TNIP2Q8NFZ5 429 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 OR13J1Q8NGT2 312 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ANKRD49Q8WVL7 239 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 FBXL20Q96IG2 436 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 C3orf30Q96M34 536 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 GAD1Q99259 594 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MAP10Q9P2G4 905 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 NYNRINQ9P2P1 1898 aaKnown RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 A0A0J9YYE9 177 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ARL5CA6NH57 179 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 AKAP10O43572 662 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 PEX11BO96011 259 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 GRIA3P42263 894 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 SLC5A3P53794 718 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 NUP107P57740 925 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ESRRGP62508 458 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 GRIK2Q13002 908 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
CD44-206ENST00000415148 ZNF554Q86TJ5 538 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 COLGALT2Q8IYK4 626 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 MIER2Q8N344 545 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ZNF786Q8N393 782 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 CBR4Q8N4T8 237 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 NLGN2Q8NFZ4 835 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 GPR150Q8NGU9 434 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 RHEBL1Q8TAI7 183 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 TADA1Q96BN2 335 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 C9orf16Q9BUW7 83 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ATXN3LQ9H3M9 355 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ACTR3BQ9P1U1 418 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 EGFL7Q9UHF1 273 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 ZNF711Q9Y462 761 aa9.79□□□□□ -0.84
CD44-206ENST00000415148 PATJQ8NI35 1801 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TYW5A2RUC4 315 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 M0QZ92 97 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 PPP6CO00743 305 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ALDOCP09972 364 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 SLC2A3P11169 496 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 FCGR1AP12314 374 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 FDXRP22570 491 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 OXTRP30559 389 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TTKP33981 857 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 KCNC1P48547 511 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 SUOXP51687 545 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 APLP1P51693 650 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 CDKN2DP55273 166 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ACVR1Q04771 509 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 PMS2P3Q13401 168 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 PCSK7Q16549 785 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ZBED5Q49AG3 693 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 GPR158Q5T848 1215 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 MARC1Q5VT66 337 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TMEM207Q6UWW9 146 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 Q6ZNX1 250 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 LYSMD3Q7Z3D4 306 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms