RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 C2orf81A6NN90 581 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
CNOT4-204ENST00000414802 CTIFO43310 598 aaKnown RBP13.1□□□□□ -0.31
CNOT4-204ENST00000414802 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
CNOT4-204ENST00000414802 ZNF30P17039 623 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 LPOP22079 712 aaPredicted RBP13.1□□□□□ -0.31
CNOT4-204ENST00000414802 ARSDP51689 593 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 FGL2Q14314 439 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 ESRP1Q6NXG1 681 aaKnown RBP13.1□□□□□ -0.31
CNOT4-204ENST00000414802 TMC3Q7Z5M5 1100 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 OR13J1Q8NGT2 312 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 OR2T34Q8NGX1 318 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 MFSD3Q96ES6 412 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 MYOCQ99972 504 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 FZD3Q9NPG1 666 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 IL17CQ9P0M4 197 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 LRP4O75096 1905 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 TMEM131Q92545 1883 aa13.1□□□□□ -0.31
CNOT4-204ENST00000414802 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 OR51F1A6NGY5 319 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 PRR33A8MZF0 331 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 H0Y858 1186 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 EIF3HO15372 352 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 GPR39O43194 453 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 FSBPO95073 299 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 BPIP17213 487 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 PGAM1P18669 254 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 OXTRP30559 389 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 HOXA6P31267 233 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 MAGEA4P43358 317 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 ANGPT1Q15389 498 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 Q6ZVL8 140 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 PELI3Q8N2H9 469 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 GPR26Q8NDV2 337 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 SNX19Q92543 992 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 FCRL3Q96P31 734 aaPredicted RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 SUDS3Q9H7L9 328 aaPredicted RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 MRM3Q9HC36 420 aaKnown RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 ZC3H7BQ9UGR2 993 aaKnown RBP13.09□□□□□ -0.31
CNOT4-204ENST00000414802 RAB21Q9UL25 225 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 CACNA1EQ15878 2313 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
CNOT4-204ENST00000414802 NDUFS2O75306 463 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 RECQL5O94762 991 aaPredicted RBP13.08□□□□□ -0.31
CNOT4-204ENST00000414802 HMGCLP35914 325 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 SPINT3P49223 89 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.31
CNOT4-204ENST00000414802 RPL6Q02878 288 aaKnown RBP13.08□□□□□ -0.31
CNOT4-204ENST00000414802 CRYMQ14894 314 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 ZNF284Q2VY69 593 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 ANKRD20A4Q4UJ75 823 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 FAM151BQ6UXP7 276 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 UNC5AQ6ZN44 842 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 TECPR1Q7Z6L1 1165 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 LONP2Q86WA8 852 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 UNC5BQ8IZJ1 945 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 PYROXD1Q8WU10 500 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 STYXQ8WUJ0 223 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 SCAMP4Q969E2 229 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 LRRC39Q96DD0 335 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 NUS1Q96E22 293 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 DTD2Q96FN9 168 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 PHACTR1Q9C0D0 580 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 TREX1Q9NSU2 369 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 NLE1Q9NVX2 485 aaPredicted RBP13.08□□□□□ -0.31
CNOT4-204ENST00000414802 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 FBXO4Q9UKT5 387 aa13.08□□□□□ -0.31
CNOT4-204ENST00000414802 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 FAM237BA0A1B0GVD1 139 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 GOLGA8TH3BQL2 631 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 PSMD11O00231 422 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 GAPDHSO14556 408 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 WNT9AO14904 365 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 SLC31A1O15431 190 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 RPP40O75818 363 aaKnown RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 TM7SF2O76062 418 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 PCCBP05166 539 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 IGHV4-34P06331 123 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 F7P08709 466 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 PRSS56P0CW18 603 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms