RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TMEM131Q92545 1883 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 SDK1Q7Z5N4 2213 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 A0A087X0T9 212 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 A0A1W2PQF6 199 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 TCRBV5S1A1TA0A578 114 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ZC3H12DA2A288 527 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 SIGLEC16A6NMB1 481 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 A6NNZ2 444 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 E9PAM4 449 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAM72CH0Y354 149 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RTN2O75298 545 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RPP40O75818 363 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 PAPSS2O95340 614 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 IGHA1P01876 353 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 SERPING1P05155 500 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAM228BP0C875 321 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 SLC2A3P11169 496 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAHP16930 419 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 GABRG2P18507 467 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RHCEP18577 417 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 POLR2EP19388 210 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 BCKDHBP21953 392 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 TRHRP34981 398 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 RDXP35241 583 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 ARL4AP40617 200 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 STK19P49842 368 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 HDAC4P56524 1084 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RHDQ02161 417 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 GFPT1Q06210 699 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 ADCY2Q08462 1091 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 DBPQ10586 325 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 SIM2Q14190 667 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 TRIM25Q14258 630 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 MYBPC3Q14896 1274 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 NR0B2Q15466 257 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RSPO4Q2I0M5 234 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 ZNF528Q3MIS6 628 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 PREPLQ4J6C6 727 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 EOGTQ5NDL2 527 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RABGAP1LQ5R372 815 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 CCDC122Q5T0U0 273 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAM72AQ5TYM5 149 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 MBNL2Q5VZF2 373 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 SPECC1LQ69YQ0 1117 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAM72DQ6L9T8 149 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ZC3H14Q6PJT7 736 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 KIAA1324Q6UXG2 1013 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 SERPINA13PQ6UXR4 307 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ZNF574Q6ZN55 896 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 USP45Q70EL2 814 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 BNIPLQ7Z465 357 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 C11orf96Q7Z7L8 435 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ADIPOR2Q86V24 386 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 KBTBD6Q86V97 674 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 WDR5BQ86VZ2 330 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 FAM72BQ86X60 149 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 CCDC117Q8IWD4 279 aaPredicted RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 DRC7Q8IY82 874 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 PYROXD2Q8N2H3 581 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 DEFB119Q8N690 84 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ZBTB44Q8NCP5 570 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 NELL1Q92832 810 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 NT5C3BQ969T7 300 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 AZIN2Q96A70 460 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ARHGEF26Q96DR7 871 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 C1GALT1C1Q96EU7 318 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 CCDC120Q96HB5 630 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RPL10LQ96L21 214 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 ELAC2Q9BQ52 826 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 PACSIN1Q9BY11 444 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 SLC2A11Q9BYW1 496 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 EDEM3Q9BZQ6 932 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 UCKL1Q9NWZ5 548 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ELOVL2Q9NXB9 296 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ARHGEF38Q9NXL2 777 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 RRN3Q9NYV6 651 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ARHGAP20Q9P2F6 1191 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 INTS6Q9UL03 887 aaKnown RBP4.99□□□□□ -1.61
VPS41-205ENST00000414632 INTUQ9ULD6 942 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 SLC27A6Q9Y2P4 619 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.99□□□□□ -1.614e-8■■□□□ 14.2
VPS41-205ENST00000414632 NUMA1Q14980 2115 aa4.99□□□□□ -1.61
VPS41-205ENST00000414632 ATXN2Q99700 1313 aaKnown RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 DNAH14Q0VDD8 3507 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 A0A0D9SEW6 157 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TCAF2A6NFQ2 919 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TTC34A8MYJ7 566 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TPP1O14773 563 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 MSTNO14793 375 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 DYRK3O43781 588 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 SNAP91O60641 907 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 MFAP3LO75121 409 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ALDH1A2O94788 518 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ENDOD1O94919 500 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 F9P00740 461 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 LMNAP02545 664 aaKnown RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 RHOCP08134 193 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms