RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FKBPLQ9UIM3 349 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 FBXO5Q9UKT4 447 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SARDHQ9UL12 918 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 PPM1HQ9ULR3 514 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SMG5Q9UPR3 1016 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 PKP3Q9Y446 797 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 STON1Q9Y6Q2 735 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CKAP5Q14008 2032 aa6.65□□□□□ -1.35
VPS41-204ENST00000413141 BPTFQ12830 3046 aa6.65□□□□□ -1.35
VPS41-204ENST00000413141 UNC80Q8N2C7 3258 aa6.65□□□□□ -1.35
VPS41-204ENST00000413141 TMEM120BA0PK00 339 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 C16orf96A6NNT2 1141 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 LOC730098B7Z3J9 87 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 C1QTNF3-AMACRE9PGA6 284 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 GOLGA8RI6L899 631 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 KPNA3O00505 521 aaPredicted RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 GAPDHSO14556 408 aaPredicted RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 TPP1O14773 563 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CD3EAPO15446 510 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 PRPF4O43172 522 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS41-204ENST00000413141 SPINT1O43278 529 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 TYROBPO43914 113 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 RFPL1O75677 317 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CLDN7O95471 211 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PRAMEF1O95521 474 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 EGFP01133 1207 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 AHSGP02765 367 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 MT-ND3P03897 115 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 C1SP09871 688 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PRSS56P0CW18 603 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CYP2A6P11509 494 aaPredicted RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 SRFP11831 508 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 GLULP15104 373 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 ZNF30P17039 623 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 DRD1P21728 446 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 NFKBIAP25963 317 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 VIPR1P32241 457 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 MC4RP32245 332 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 TIE1P35590 1138 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SPAM1P38567 509 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 MAGEA12P43365 314 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 LEPRP48357 1165 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 CD151P48509 253 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SERPINB8P50452 374 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 STC1P52823 247 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 METAP1P53582 386 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CBX1P83916 185 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 XIAPP98170 497 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PFKPQ01813 784 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SEMG2Q02383 582 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 GRSF1Q12849 480 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS41-204ENST00000413141 RALGDSQ12967 914 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 DNAJC3Q13217 504 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PEX6Q13608 980 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PUS10Q3MIT2 529 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 POM121L1PQ3SYA9 428 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 FASTKD1Q53R41 847 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 ZNF789Q5FWF6 425 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 IER5LQ5T953 404 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 MRNIPQ6NTE8 343 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 ERAP2Q6P179 960 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CRTC1Q6UUV9 634 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 TIFABQ6ZNK6 161 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SH2D5Q6ZV89 423 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 DPPA4Q7L190 304 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 DSG4Q86SJ6 1040 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 CHPFQ8IZ52 775 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 DCLK2Q8N568 766 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 BANPQ8N9N5 519 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 ACVR1CQ8NER5 493 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 OR4L1Q8NH43 312 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PIP4K2CQ8TBX8 421 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 ARRDC3Q96B67 414 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 ALKBH8Q96BT7 664 aaKnown RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 PPP1R16AQ96I34 528 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 APOPT1Q96IL0 206 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 GABRG3Q99928 467 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 BPIFA1Q9NP55 256 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PCDH12Q9NPG4 1184 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PRSS16Q9NQE7 514 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SLC2A4RGQ9NR83 387 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 FBXO6Q9NRD1 293 aaPredicted RBP6.64□□□□□ -1.35
VPS41-204ENST00000413141 SNX15Q9NRS6 342 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PCMTD2Q9NV79 361 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 SUN2Q9UH99 717 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 FAM50BQ9Y247 325 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 PLXNA2O75051 1894 aa6.64□□□□□ -1.35
VPS41-204ENST00000413141 GLYATL1P3A0A0U1RQE8 302 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 FAM95CA0A1B0GW59 222 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 FAM47DPA6NHR8 397 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 SHISA7A6NL88 538 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 A8MX80 341 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 GPR39O43194 453 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 SPAG7O75391 227 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 SRP72O76094 671 aaKnown RBP6.63□□□□□ -1.35
VPS41-204ENST00000413141 HAUS5O94927 633 aa6.63□□□□□ -1.35
VPS41-204ENST00000413141 S1PR4O95977 384 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms