RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PYGMP11217 842 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 TSHRP16473 764 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 ACP1P24666 158 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 BLKP51451 505 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 CLDN6P56747 220 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 GALNT3Q14435 633 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 PCSK7Q16549 785 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 CCDC181Q5TID7 509 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 RAET1GQ6H3X3 334 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 UNQ6494/PRO21346Q6UXR6 183 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 MARCH9Q86YJ5 346 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 OR56A4Q8NGH8 313 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 GATA6Q92908 595 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 PDXPQ96GD0 296 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 TBATAQ96M53 351 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 QKIQ96PU8 341 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 MLPHQ9BV36 600 aaPredicted RBP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 OSBPL8Q9BZF1 889 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 ABCG8Q9H221 673 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 MRPL40Q9NQ50 206 aaKnown RBP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 ADGRG1Q9Y653 693 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 USP24Q9UPU5 2620 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 COL27A1Q8IZC6 1860 aaPredicted RBP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 UNC13CQ8NB66 2214 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 LY6G6EA0A0G2JKS1 128 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 MTSS1O43312 755 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 FTCDO95954 541 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 TNFP01375 233 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 CKMT1AP12532 417 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 CTSEP14091 401 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 NFKB1P19838 968 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 CD68P34810 354 aaPredicted RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 PTPN7P35236 360 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 STC1P52823 247 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 NOMO1Q15155 1222 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 ZCCHC8Q6NZY4 707 aaKnown RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 HEATR4Q86WZ0 1026 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 SYCE1Q8N0S2 351 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 GALNT15Q8N3T1 639 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 FAM181AQ8N9Y4 354 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 ACTL9Q8TC94 416 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 HTR3CQ8WXA8 447 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 OR1E3Q8WZA6 343 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 TADA1Q96BN2 335 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 TRIB3Q96RU7 358 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 LYSMD1Q96S90 227 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 ADGRE3Q9BY15 652 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 C10orf88Q9H8K7 445 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 FGF22Q9HCT0 170 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 PHPT1Q9NRX4 125 aaPredicted RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 UBP1Q9NZI7 540 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 KLHL8Q9P2G9 620 aaPredicted RBP18.81■□□□□ 0.6
TRIM56-202ENST00000412507 DNPEPQ9ULA0 475 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 EFR3BQ9Y2G0 817 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 CAPN6Q9Y6Q1 641 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 U3KQA8 63 aa18.81■□□□□ 0.6
TRIM56-202ENST00000412507 C1orf232A0A0U1RR37 186 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 FAM149AA5PLN7 773 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 LMO7DNF2Z398 122 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 H7C0C1 242 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 TPP1O14773 563 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 YY2O15391 372 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 PMPCBO75439 489 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 ANXA6P08133 673 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CDK4P11802 303 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 MYCLP1P12525 358 aaPredicted RBP18.8■□□□□ 0.6
TRIM56-202ENST00000412507 KELP23276 732 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CETN2P41208 172 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 GPR1P46091 355 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 ATP5OP48047 213 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CDK18Q07002 472 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 DPTQ07507 201 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 ILKQ13418 452 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 XRCC4Q13426 336 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CDKN3Q16667 212 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CCNI2Q6ZMN8 369 aaPredicted RBP18.8■□□□□ 0.6
TRIM56-202ENST00000412507 ZNF567Q8N184 647 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 FSTL5Q8N475 847 aaPredicted RBP18.8■□□□□ 0.6
TRIM56-202ENST00000412507 SCAMP4Q969E2 229 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 AP2M1Q96CW1 435 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 TEX101Q9BY14 249 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 CYP4F12Q9HCS2 524 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 MOSPD1Q9UJG1 213 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 KIF26BQ2KJY2 2108 aa18.8■□□□□ 0.6
TRIM56-202ENST00000412507 MIF4GDA9UHW6 222 aaKnown RBP18.79■□□□□ 0.6
TRIM56-202ENST00000412507 F5H423 210 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-202ENST00000412507 PDE2AO00408 941 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-202ENST00000412507 TNFRSF10CO14798 259 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 DDX3YO15523 660 aaKnown RBP18.79■□□□□ 0.6
TRIM56-202ENST00000412507 RBL1P28749 1068 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 CDK3Q00526 305 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 ELOCQ15369 112 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 SLC14A2Q15849 920 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 PID1Q7Z2X4 250 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 RNF10Q8N5U6 811 aaKnown RBP18.79■□□□□ 0.6
TRIM56-202ENST00000412507 UBL4BQ8N7F7 174 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 AGAP2Q99490 1192 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms