RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LEXMQ3ZCV2 418 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 CERKLQ49MI3 558 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SLC39A12Q504Y0 691 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TOR1AIP1Q5JTV8 583 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 C6orf163Q5TEZ5 329 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 KRT79Q5XKE5 535 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TMEM270Q6UE05 265 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 GBP6Q6ZN66 633 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SPATA19Q7Z5L4 167 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 AMIGO2Q86SJ2 522 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TMEM200AQ86VY9 491 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ADGRF3Q8IZF5 1079 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 IPMKQ8NFU5 416 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 CELF1Q92879 486 aaKnown RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 LRRC59Q96AG4 307 aaKnown RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SARAFQ96BY9 339 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 PABPC5Q96DU9 382 aaKnown RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 NLRP4Q96MN2 994 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 FAM118BQ9BPY3 351 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 MLPHQ9BV36 600 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TEX13BQ9BXU2 312 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 KLK15Q9H2R5 256 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 MAGEE1Q9HCI5 957 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ASAH2Q9NR71 780 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ARL8BQ9NVJ2 186 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ANO10Q9NW15 660 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 PLK2Q9NYY3 685 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 GDE1Q9NZC3 331 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ACTR3BQ9P1U1 418 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ABI3Q9P2A4 366 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 PLAGL1Q9UM63 463 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 AP1M2Q9Y6Q5 423 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 GPR75-ASB3A0A0A6YYF3 556 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 RGSL1A5PLK6 1076 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 ENO4A6NNW6 628 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 K7EPI3 171 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 DSCR3O14972 297 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 STRNO43815 780 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 TLR2O60603 784 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 NKX2-2O95096 273 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CBX6O95503 412 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 ENO1P06733 434 aaKnown RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CHRM5P08912 532 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CYP2D6P10635 497 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 IRF1P10914 325 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 SRCP12931 536 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PDGFRAP16234 1089 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 IL7RP16871 459 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 HOXB9P17482 250 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 TFEBP19484 476 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 TGM2P21980 687 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PROZP22891 400 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CASP3P42574 277 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 SUOXP51687 545 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 TKTL1P51854 596 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 AKAP17AQ02040 695 aaKnown RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 NPRL3Q12980 569 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 KPNB1Q14974 876 aaKnown RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 RNPS1Q15287 305 aaKnown RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 NAB2Q15742 525 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 KBTBD12Q3ZCT8 623 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PMS2CLQ68D20 193 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 TXNDC8Q6A555 127 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 SUMO4Q6EEV6 95 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 OLFM4Q6UX06 510 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 IL20RBQ6UXL0 311 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 RANBP10Q6VN20 620 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CFAP77Q6ZQR2 320 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PRSS45Q7RTY3 260 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 ATAD1Q8NBU5 361 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PTPMT1Q8WUK0 201 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 ARHGEF26Q96DR7 871 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 BICD1Q96G01 975 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 INTS14Q96SY0 518 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PKP4Q99569 1192 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 GOLPH3LQ9H4A5 285 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 HAO2Q9NYQ3 351 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 NINJ2Q9NZG7 142 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 SEPT10Q9P0V9 454 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CRNNQ9UBG3 495 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-204ENST00000412061 UPB1Q9UBR1 384 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 SERGEFQ9UGK8 458 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 DUSP12Q9UNI6 340 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 CMAHPQ9Y471 501 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 LIPGQ9Y5X9 500 aa4.59□□□□□ -1.67
BRCA1-204ENST00000412061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 RNF103-CHMP3A0A140T963 221 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 EDDM13A0A1B0GTR0 161 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 A0A1B0GVM2 712 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 SYCE3A1L190 88 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 RNF103O00237 685 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 SMPD2O60906 423 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ZC3H11AO75152 810 aaKnown RBP eCLIP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 DDAH2O95865 285 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 BCL10O95999 233 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms