RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 STC1P52823 247 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 ARHGEF7Q14155 803 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 PDK1Q15118 436 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 PRKD1Q15139 912 aaPredicted RBP19.03■□□□□ 0.64
SF3A1-202ENST00000411423 NR0B2Q15466 257 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 KATNAL2Q8IYT4 538 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 PDCD7Q8N8D1 485 aaKnown RBP19.03■□□□□ 0.64
SF3A1-202ENST00000411423 KYQ8NBH2 561 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 EID2BQ96D98 161 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 TRIB3Q96RU7 358 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 FRMD8Q9BZ67 464 aaPredicted RBP19.03■□□□□ 0.64
SF3A1-202ENST00000411423 TMEM168Q9H0V1 697 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 SIRPGQ9P1W8 387 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 RABGEF1Q9UJ41 708 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 CLCA2Q9UQC9 943 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 ST14Q9Y5Y6 855 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 GP1BAP07359 652 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 MYCLP1P12525 358 aaPredicted RBP19.02■□□□□ 0.64
SF3A1-202ENST00000411423 CTSEP14091 401 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 PTPN3P26045 913 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 CD68P34810 354 aaPredicted RBP19.02■□□□□ 0.64
SF3A1-202ENST00000411423 POLD2P49005 469 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 BLKP51451 505 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 EPHB1P54762 984 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 CDK3Q00526 305 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 E2F1Q01094 437 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 GALNT3Q14435 633 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 ELOCQ15369 112 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 RAET1GQ6H3X3 334 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 FSTL5Q8N475 847 aaPredicted RBP19.02■□□□□ 0.64
SF3A1-202ENST00000411423 SPATA22Q8NHS9 363 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 HAUS1Q96CS2 278 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 IMP4Q96G21 291 aaKnown RBP19.02■□□□□ 0.64
SF3A1-202ENST00000411423 LYSMD1Q96S90 227 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 USP29Q9HBJ7 922 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 CYP4F12Q9HCS2 524 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 TRIM10Q9UDY6 481 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 ASXL3Q9C0F0 2248 aa19.02■□□□□ 0.64
SF3A1-202ENST00000411423 PRSS38A1L453 326 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 GOLGA6CA6NDK9 693 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 GOLGA6BA6NDN3 693 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 TNFRSF10CO14798 259 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 PPP1R12AO14974 1030 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 MT-CYBP00156 380 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 GOLGA6DP0CG33 693 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 DUSP3P51452 185 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 DPTQ07507 201 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 WASHC5Q12768 1159 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 ODF2Q5BJF6 829 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 KDELC2Q7Z4H8 507 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 DAAM2Q86T65 1068 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 TRIM74Q86UV6 250 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 NRROSQ86YC3 692 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 CACTIN-AS1Q8N1I8 211 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 SUDS3Q9H7L9 328 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 C10orf88Q9H8K7 445 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 GOLGA6AQ9NYA3 693 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 GULP1Q9UBP9 304 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 DKK4Q9UBT3 224 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 RALYQ9UKM9 306 aaKnown RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 PADI4Q9UM07 663 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 RAXQ9Y2V3 346 aa19.01■□□□□ 0.63
SF3A1-202ENST00000411423 PCYT1BQ9Y5K3 369 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-202ENST00000411423 ANKRD66B4E2M5 251 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 ZRANB2O95218 330 aaKnown RBP eCLIP19■□□□□ 0.63
SF3A1-202ENST00000411423 PIRTP0C851 137 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 ZNF30P17039 623 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 TEAD1P28347 426 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 CTNNA1P35221 906 aaKnown RBP19■□□□□ 0.63
SF3A1-202ENST00000411423 RPL26P61254 145 aaKnown RBP19■□□□□ 0.63
SF3A1-202ENST00000411423 TFDP2Q14188 446 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 TEX44Q53QW1 395 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 TFDP3Q5H9I0 405 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 AADACL2Q6P093 401 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 RCOR2Q8IZ40 523 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 ARL10Q8N8L6 244 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 SPC24Q8NBT2 197 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 ATL2Q8NHH9 583 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 MAPK15Q8TD08 544 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 AP2M1Q96CW1 435 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 RIOK2Q9BVS4 552 aaKnown RBP19■□□□□ 0.63
SF3A1-202ENST00000411423 HEMGNQ9BXL5 484 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 SLC25A51Q9H1U9 297 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 GLOD4Q9HC38 313 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 PHPT1Q9NRX4 125 aaPredicted RBP19■□□□□ 0.63
SF3A1-202ENST00000411423 MOSPD1Q9UJG1 213 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 SUFUQ9UMX1 484 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 RPL26L1Q9UNX3 145 aaKnown RBP19■□□□□ 0.63
SF3A1-202ENST00000411423 GPR34Q9UPC5 381 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 PLEKHM1Q9Y4G2 1056 aa19■□□□□ 0.63
SF3A1-202ENST00000411423 A0A1W2PNU3 283 aaPredicted RBP18.99■□□□□ 0.63
SF3A1-202ENST00000411423 GRID2IPA4D2P6 1211 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 BTNL10A8MVZ5 291 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 PJA2O43164 708 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 NOBOXO60393 691 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 NFKBIAP25963 317 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 GPR1P46091 355 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 NR2C2P49116 596 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 VAV2P52735 878 aa18.99■□□□□ 0.63
SF3A1-202ENST00000411423 RTP5Q14D33 572 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms