RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PTPN9P43378 593 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 FASLGP48023 281 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 FNTBP49356 437 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LHX2P50458 406 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CRISP3P54108 245 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC12A3P55017 1021 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CACNG7P62955 275 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 MGAT5Q09328 741 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ELAVL2Q12926 359 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC39A6Q13433 755 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 IL10RAQ13651 578 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TSC22D1Q15714 1073 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SYT16Q17RD7 645 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF674Q2M3X9 581 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PIGGQ5H8A4 983 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM162BQ5T6X4 162 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCTD18Q6PI47 426 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 INO80CQ6PI98 192 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LINC00696Q6ZRV3 163 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 EEPD1Q7L9B9 569 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KRT74Q7RTS7 529 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KANSL1Q7Z3B3 1105 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC9B2Q86UD5 537 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 NFE4Q86UQ8 179 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF227Q86WZ6 799 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SAXO1Q8IYX7 474 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LSMEM2Q8N112 164 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 OSR2Q8N2R0 312 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM109AQ8N4B1 249 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 DCLK2Q8N568 766 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ENDOVQ8N8Q3 282 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 DDHD1Q8NEL9 900 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR2T6Q8NHC8 308 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CEP76Q8TAP6 659 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF596Q8TC21 504 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PIFOQ8TCI5 191 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF480Q8WV37 535 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SNX33Q8WV41 574 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CANT1Q8WVQ1 401 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCTD13Q8WZ19 329 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SYN2Q92777 582 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 RSRC1Q96IZ7 334 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LRIG1Q96JA1 1093 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TNIP3Q96KP6 325 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 NEUROD6Q96NK8 337 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ASB16Q96NS5 453 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TAAR1Q96RJ0 339 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TARS2Q9BW92 718 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 SHARPINQ9H0F6 387 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 GGA3Q9NZ52 723 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 MOCS1Q9NZB8 636 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 IL36RNQ9UBH0 155 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 P2RX2Q9UBL9 471 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 HACL1Q9UJ83 578 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PURGQ9UJV8 347 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF490Q9ULM2 529 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CNPY2Q9Y2B0 182 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KNL1Q8NG31 2342 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PIKFYVEQ9Y2I7 2098 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TANC2Q9HCD6 1990 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KIAA1210Q9ULL0 1709 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TONSLQ96HA7 1378 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CHD3Q12873 2000 aaKnown RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 EML5Q05BV3 1969 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGLV7-46A0A075B6I9 117 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 A0A1W2PPM0 123 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 GAGE12JA6NER3 117 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CCDC85CA6NKD9 419 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF879B4DU55 563 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGLL5B9A064 214 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 VWA5AO00534 786 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC7A4O43246 635 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KLF4O43474 513 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF861PO60384 105 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 STAM2O75886 525 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SCELO95171 688 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CAVIN2O95810 425 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 BCL10O95999 233 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGLV6-57P01721 117 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 THY1P04216 161 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SBK3P0C264 359 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CYP2C9P11712 490 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 TYRP14679 529 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 RPA2P15927 270 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SELEP16581 610 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF22P17026 224 aaPredicted RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KDELR1P24390 212 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 HTR1FP30939 366 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXD12P35452 270 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 HNF4AP41235 474 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 TNFSF9P41273 254 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SCNN1BP51168 640 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 NLRP5P59047 1200 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ABCE1P61221 599 aaKnown RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM193AP78312 1265 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 PIGFQ07326 219 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF415Q09FC8 603 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 APOBRQ0VD83 1088 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 PAK1Q13153 545 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 RUNX3Q13761 415 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms