RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 BBIP1A8MTZ0 92 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 TRIM24O15164 1050 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 UPP2O95045 317 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 ACRP10323 421 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 CD1DP15813 335 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 LIN52Q52LA3 116 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 UNC50Q53HI1 259 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 GPR158Q5T848 1215 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 RAB44Q7Z6P3 723 aaPredicted RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 HMGCLL1Q8TB92 370 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 ROPN1LQ96C74 230 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 MARK4Q96L34 752 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 MAGEH1Q9H213 219 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 ELAC1Q9H777 363 aaKnown RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 TMEM161AQ9NX61 479 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 MARCH4Q9P2E8 410 aaPredicted RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 OR1E1P30953 314 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 GPR17Q13304 367 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 ZNF235Q14590 738 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 UGT3A2Q3SY77 523 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 C10orf120Q5SQS8 335 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 GK5Q6ZS86 529 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 TBATAQ96M53 351 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 TCF12Q99081 682 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 DDX50Q9BQ39 737 aaKnown RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 UNKQ9C0B0 810 aaKnown RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 ALG9Q9H6U8 611 aa23.77■■□□□ 1.4
PMS1-205ENST00000409985 PAPOLBQ9NRJ5 636 aaKnown RBP23.77■■□□□ 1.4
PMS1-205ENST00000409985 SLC12A8A0AV02 714 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 NDST3O95803 873 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 SERPINF2P08697 491 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 PABPC4LP0CB38 370 aaKnown RBP23.76■■□□□ 1.39
PMS1-205ENST00000409985 FGFR3P22607 806 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 TAF10Q12962 218 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 REP15Q6BDI9 236 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 ZNF354CQ86Y25 554 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 ZNF483Q8TF39 744 aaPredicted RBP23.76■■□□□ 1.39
PMS1-205ENST00000409985 USP13Q92995 863 aaPredicted RBP23.76■■□□□ 1.39
PMS1-205ENST00000409985 PHF21BQ96EK2 531 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 TMA16Q96EY4 203 aaKnown RBP23.76■■□□□ 1.39
PMS1-205ENST00000409985 SYTL2Q9HCH5 934 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 SPAG4Q9NPE6 437 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 PLK2Q9NYY3 685 aa23.76■■□□□ 1.39
PMS1-205ENST00000409985 ARIH1Q9Y4X5 557 aaPredicted RBP23.76■■□□□ 1.39
PMS1-205ENST00000409985 TTC3P53804 2025 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 CAPN8A6NHC0 703 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 UBFD1O14562 309 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 SUPT7LO94864 414 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 GOT2P00505 430 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 CES1P23141 567 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 SH3BGRP55822 239 aaPredicted RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 RHDQ02161 417 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 PDAP1Q13442 181 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 SPATS1Q496A3 300 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 AGKQ53H12 422 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 SAMD4BQ5PRF9 694 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 ZNF549Q6P9A3 640 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 OR4L1Q8NH43 312 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 NCSTNQ92542 709 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 MGME1Q9BQP7 344 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 AARSD1Q9BTE6 412 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 TNFRSF12AQ9NP84 129 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 POLR3BQ9NW08 1133 aaPredicted RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 CD300AQ9UGN4 299 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 SLC4A7Q9Y6M7 1214 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 MICAL3Q7RTP6 2002 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 SMIM31A0A1B0GVY4 71 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 FBP2O00757 339 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 NRP2O60462 931 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 DNAJA2O60884 412 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 ZNF37AP17032 561 aaPredicted RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 TACR2P21452 398 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 STC1P52823 247 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 STX1BP61266 288 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 ROR2Q01974 943 aaKnown RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 TMEM102Q8N9M5 508 aaPredicted RBP23.75■■□□□ 1.39
PMS1-205ENST00000409985 ATAD1Q8NBU5 361 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 C19orf60Q96EN9 201 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 TRIB3Q96RU7 358 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 CATSPERZQ9NTU4 200 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 ADA2Q9NZK5 511 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 TMEM181Q9P2C4 612 aa23.75■■□□□ 1.39
PMS1-205ENST00000409985 ENPP3O14638 875 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 VPS4BO75351 444 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 PARNO95453 639 aaKnown RBP23.74■■□□□ 1.39
PMS1-205ENST00000409985 CRTAMO95727 393 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 CD9P21926 228 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 PEX19P40855 299 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 KCNC1P48547 511 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 TIAL1Q01085 375 aaKnown RBP eCLIP23.74■■□□□ 1.393e-9■■■■■ 32.4
PMS1-205ENST00000409985 CREB5Q02930 508 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 RASIP1Q5U651 963 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 CYHR1Q6ZMK1 362 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 MIB1Q86YT6 1006 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 PCYOX1LQ8NBM8 494 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 SEPT8Q92599 483 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 PTERQ96BW5 349 aa23.74■■□□□ 1.39
PMS1-205ENST00000409985 NLE1Q9NVX2 485 aaPredicted RBP23.74■■□□□ 1.39
PMS1-205ENST00000409985 CROTQ9UKG9 612 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms