RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ITKQ08881 620 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 GALNT2Q10471 571 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 DPYSL3Q14195 570 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 HLTFQ14527 1009 aaKnown RBP eCLIP14.73□□□□□ -0.05
CBX3-203ENST00000409747 PAFAH1B3Q15102 231 aaKnown RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 PDK2Q15119 407 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 IFI16Q16666 785 aaKnown RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 CBARPQ8N350 705 aaPredicted RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 KCTD6Q8NC69 237 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 CTNNBL1Q8WYA6 563 aaPredicted RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 FATE1Q969F0 183 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 SEMA3CQ99985 751 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 FRMD8Q9BZ67 464 aaPredicted RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 IFNKQ9P0W0 207 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 CTTNBP2NLQ9P2B4 639 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 LRIT1Q9P2V4 623 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 PCDHGA7Q9Y5G6 932 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 ZNF30P17039 623 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 IL4RP24394 825 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 DPTQ07507 201 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 VAC14Q08AM6 782 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 MMRN1Q13201 1228 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 NCBP2-AS2Q69YL0 99 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 ALG1LQ6GMV1 187 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 HSD11B1LQ7Z5J1 315 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 SPRED1Q7Z699 444 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 B3GNT8Q7Z7M8 397 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 PELI3Q8N2H9 469 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 GPBAR1Q8TDU6 330 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 MAML1Q92585 1016 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CPNE5Q9HCH3 593 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 RNF215Q9Y6U7 377 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 MGAQ8IWI9 3026 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 ATMQ13315 3056 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CAPN8A6NHC0 703 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 MATN3O15232 486 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CASC3O15234 703 aaKnown RBP14.72□□□□□ -0.05
CBX3-203ENST00000409747 PROSCO94903 275 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CEACAM5P06731 702 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CD48P09326 243 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 H2AFZP0C0S5 128 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 JMJD7P0C870 316 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 MX2P20592 715 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CCNCP24863 283 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 HNRNPH3P31942 346 aaKnown RBP14.72□□□□□ -0.05
CBX3-203ENST00000409747 CASP14P31944 242 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 GJC1P36383 396 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 ARSEP51690 589 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 EPHB1P54762 984 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 ANKRD20A8PQ5CZ79 823 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 Q6ZVL8 140 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 H2AFVQ71UI9 128 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 Q8N9G6 341 aaPredicted RBP14.72□□□□□ -0.05
CBX3-203ENST00000409747 CCL4L1Q8NHW4 92 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 SNRNP27Q8WVK2 155 aaKnown RBP14.72□□□□□ -0.05
CBX3-203ENST00000409747 PIH1D2Q8WWB5 315 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 WBP1Q96G27 269 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 FOXP3Q9BZS1 431 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 CDH19Q9H159 772 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
CBX3-203ENST00000409747 A0A0J9YYE9 177 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 PMS2P1A4D2B8 440 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 FZD6O60353 706 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TRBC1P01850 177 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 IVLP07476 585 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 CTPS1P17812 591 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 UGT1A5P35504 534 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 GPR1P46091 355 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 GNPDA1P46926 289 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 BIRC2Q13490 618 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TRIM14Q14142 442 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 CLPPQ16740 277 aaPredicted RBP14.71□□□□□ -0.05
CBX3-203ENST00000409747 MAP9Q49MG5 647 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TAF1BQ53T94 588 aaPredicted RBP14.71□□□□□ -0.05
CBX3-203ENST00000409747 LRRC66Q68CR7 880 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 ADAMTSL4Q6UY14 1074 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 ZNF765Q7L2R6 523 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TECPR1Q7Z6L1 1165 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TSPAN33Q86UF1 283 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 RAVER1Q8IY67 606 aaKnown RBP14.71□□□□□ -0.05
CBX3-203ENST00000409747 ZDHHC1Q8WTX9 485 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 ZNF830Q96NB3 372 aaPredicted RBP14.71□□□□□ -0.05
CBX3-203ENST00000409747 TSGA13Q96PP4 275 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 SUDS3Q9H7L9 328 aaPredicted RBP14.71□□□□□ -0.05
CBX3-203ENST00000409747 SUFUQ9UMX1 484 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 NENFQ9UMX5 172 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 SLC17A4Q9Y2C5 497 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 TTLL3Q9Y4R7 772 aa14.71□□□□□ -0.05
CBX3-203ENST00000409747 RHPN2P1A8MT19 583 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 MAN1A1P33908 653 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 RPL26P61254 145 aaKnown RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 ZFP36L1Q07352 338 aaKnown RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 SLC18A3Q16572 532 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 KIF26BQ2KJY2 2108 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 NLRP8Q86W28 1048 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 JAMLQ86YT9 394 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms