RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FOXK2Q01167 660 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 DPTQ07507 201 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 MPP3Q13368 585 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 MYLKQ15746 1914 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 LYSMD3Q7Z3D4 306 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 CCDC110Q8TBZ0 833 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 WDR92Q96MX6 357 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 SPATA13Q96N96 652 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ABCG8Q9H221 673 aa31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 APOBEC3BQ9UH17 382 aaKnown RBP31.11■■■□□ 2.57
TRAF3IP1-203ENST00000409739 LOC285095A0A1B0GVY8 99 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 CACNB4O00305 520 aaPredicted RBP31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 HOXC4P09017 264 aaPredicted RBP31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ALG11Q2TAA5 492 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ENPP7Q6UWV6 458 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 NYAP1Q6ZVC0 841 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ZNF765Q7L2R6 523 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 REXO1L1PQ8IX06 675 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 RAVER1Q8IY67 606 aaKnown RBP31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 IPMKQ8NFU5 416 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ATG4AQ8WYN0 398 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 LGR4Q9BXB1 951 aa31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ZFC3H1O60293 1989 aaKnown RBP31.1■■■□□ 2.57
TRAF3IP1-203ENST00000409739 GOLGA6CA6NDK9 693 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 GOLGA6BA6NDN3 693 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ATXN1LP0C7T5 689 aaKnown RBP31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 GOLGA6DP0CG33 693 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 GIMD1P0DJR0 217 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 PSMB4P28070 264 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 PPARDQ03181 441 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 RAET1GQ6H3X3 334 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 HEATR4Q86WZ0 1026 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 NRSN1Q8IZ57 195 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ATL2Q8NHH9 583 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 BTN2A2Q8WVV5 523 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 SCAMP4Q969E2 229 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 AP2M1Q96CW1 435 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 MAGEE1Q9HCI5 957 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TOR4AQ9NXH8 423 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 GOLGA6AQ9NYA3 693 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 KLQ9UEF7 1012 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ZNF711Q9Y462 761 aa31.09■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ZNF106Q9H2Y7 1883 aaKnown RBP31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TRIM38O00635 465 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 FFAR2O15552 330 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TNFSF14O43557 240 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 SOD1P00441 154 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 FTH1P19P0C7X4 201 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 MYCLP1P12525 358 aaPredicted RBP31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TEAD1P28347 426 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 SIRPB2Q5JXA9 342 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 FAXCQ5TGI0 409 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 KCTD16Q68DU8 428 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 CCDC70Q6NSX1 233 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 FAM71DQ8N9W8 422 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 OR4C6Q8NH72 309 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 CCHCR1Q8TD31 782 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TSACCQ96A04 125 aaPredicted RBP31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 EID2BQ96D98 161 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 PDXPQ96GD0 296 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 CNDP2Q96KP4 475 aaKnown RBP31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 LRRC61Q9BV99 259 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TEX101Q9BY14 249 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 ZFYVE1Q9HBF4 777 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 SHOC2Q9UQ13 582 aa31.08■■■□□ 2.57
TRAF3IP1-203ENST00000409739 TMEM202A6NGA9 273 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 AQP9O43315 295 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 LDOC1O95751 146 aaPredicted RBP31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 EPOP01588 193 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 PMLP29590 882 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 CHRNA4P43681 627 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SPINT3P49223 89 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 GEMP55040 296 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SRP54P61011 504 aaKnown RBP31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 CDK3Q00526 305 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 HID1Q8IV36 788 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 LMX1AQ8TE12 382 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 TBATAQ96M53 351 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 TMEM121Q9BTD3 319 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SLC13A1Q9BZW2 595 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 FGF22Q9HCT0 170 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 PHPT1Q9NRX4 125 aaPredicted RBP31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 PKD2L2Q9NZM6 624 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SPASTQ9UBP0 616 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SPO11Q9Y5K1 396 aa31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 ARHGEF17Q96PE2 2063 aaPredicted RBP31.07■■■□□ 2.56
TRAF3IP1-203ENST00000409739 C5orf60A6NFR6 353 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SCAMP1O15126 338 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 ANXA9O76027 345 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 TNNT3P45378 269 aaPredicted RBP31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 GPR1P46091 355 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 HK3P52790 923 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 GDF10P55107 478 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SLC1A5Q15758 541 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 PRRT3Q5FWE3 981 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SLCO6A1Q86UG4 719 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 NLRP8Q86W28 1048 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 SLC25A41Q8N5S1 370 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 OR56A4Q8NGH8 313 aa31.06■■■□□ 2.56
TRAF3IP1-203ENST00000409739 OR1E3Q8WZA6 343 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms