RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
SUMO1-208ENST00000409627 RAD18Q9NS91 495 aa16.6■□□□□ 0.25
SUMO1-208ENST00000409627 TCAF1Q9Y4C2 921 aa16.6■□□□□ 0.25
SUMO1-208ENST00000409627 ARL5AQ9Y689 179 aa16.6■□□□□ 0.25
SUMO1-208ENST00000409627 MROH6A6NGR9 719 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PRAMEF26H0Y7S4 382 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 SLC31A1O15431 190 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 DHPSP49366 369 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 ZNF140P52738 457 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 DCDC1P59894 354 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 CBLBQ13191 982 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 SEPT6Q14141 434 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 TRADDQ15628 312 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 ZDHHC20Q5W0Z9 365 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 ZDHHC24Q6UX98 284 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PRR23BQ6ZRT6 265 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 NLRP9Q7RTR0 991 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PDIK1LQ8N165 341 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 ZCCHC9Q8N567 271 aaKnown RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PPHLN1Q8NEY8 458 aaKnown RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PEX13Q92968 403 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 HINFPQ9BQA5 517 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-208ENST00000409627 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 RIMKLBQ9ULI2 386 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 PKP3Q9Y446 797 aa16.59■□□□□ 0.25
SUMO1-208ENST00000409627 SDR42E2A6NKP2 422 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 STX7O15400 261 aaKnown RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 RHOXF2BP0C7M4 288 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 BPIP17213 487 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 PSMA3P25788 255 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 AKT2P31751 481 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 PLTPP55058 493 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 ARL4CP56559 192 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 DPTQ07507 201 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 MTM1Q13496 603 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 LRRC14Q15048 493 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 HIF1AQ16665 826 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 WSCD2Q2TBF2 565 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 CCDC38Q502W7 563 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 DNAJC21Q5F1R6 531 aaKnown RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 FNBP1LQ5T0N5 605 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 ESRP1Q6NXG1 681 aaKnown RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 RFLNAQ6ZTI6 216 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 NLRP8Q86W28 1048 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 TMEM145Q8NBT3 493 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 OR4K2Q8NGD2 314 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 FBXO25Q8TCJ0 367 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 STYXQ8WUJ0 223 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 CENPTQ96BT3 561 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 LOXL4Q96JB6 756 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 SIGLEC10Q96LC7 697 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 PLEKHG4BQ96PX9 1271 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 RHOXF2Q9BQY4 288 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 PHACTR1Q9C0D0 580 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 ABCG8Q9H221 673 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 NLE1Q9NVX2 485 aaPredicted RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 EIF2B4Q9UI10 523 aaKnown RBP16.58■□□□□ 0.24
SUMO1-208ENST00000409627 SOX13Q9UN79 622 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 HCN4Q9Y3Q4 1203 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 KCTD3Q9Y597 815 aa16.58■□□□□ 0.24
SUMO1-208ENST00000409627 RAD51BO15315 384 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 BUD23O43709 281 aaKnown RBP16.57■□□□□ 0.24
SUMO1-208ENST00000409627 IGFALSP35858 605 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 SPAM1P38567 509 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 HADHAP40939 763 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 DPP6P42658 865 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 CRADDP78560 199 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 ACVR1Q04771 509 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 CUL1Q13616 776 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 IRF4Q15306 451 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 TSTD2Q5T7W7 516 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 HENMT1Q5T8I9 393 aaKnown RBP16.57■□□□□ 0.24
SUMO1-208ENST00000409627 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
SUMO1-208ENST00000409627 IFT20Q8IY31 132 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 RGL4Q8IZJ4 473 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 AGGF1Q8N302 714 aaeCLIP16.57■□□□□ 0.24
SUMO1-208ENST00000409627 MPP5Q8N3R9 675 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 GPR26Q8NDV2 337 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 OR13C4Q8NGS5 318 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 DTX3LQ8TDB6 740 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 AP2M1Q96CW1 435 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 LRRC39Q96DD0 335 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 SERAC1Q96JX3 654 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 KIFC1Q9BW19 673 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 FOXP3Q9BZS1 431 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 SEMA4AQ9H3S1 761 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 FAM83DQ9H4H8 585 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 BPIFA1Q9NP55 256 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 FZD3Q9NPG1 666 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 ZDHHC18Q9NUE0 388 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 SAMD15Q9P1V8 674 aa16.57■□□□□ 0.24
SUMO1-208ENST00000409627 CD84Q9UIB8 345 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms