RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 TUSC3Q13454 348 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 PBXIP1Q96AQ6 731 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 SERPINB11Q96P15 392 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 HBEGFQ99075 208 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 ZYG11BQ9C0D3 744 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 LAMA3Q16787 3333 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 HTTP42858 3142 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 RNF103-CHMP3A0A140T963 221 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 LDB2O43679 373 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 ASLP04424 464 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 OR1E1P30953 314 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 RANBP1P43487 201 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 OR1G1P47890 313 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 POLD3Q15054 466 aaPredicted RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 PTPRRQ15256 657 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 CBR4Q8N4T8 237 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 RANBP9Q96S59 729 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 ZNF696Q9H7X3 374 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 MRM3Q9HC36 420 aaKnown RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 MAP10Q9P2G4 905 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
ITGA6-203ENST00000409532 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
ITGA6-203ENST00000409532 ENPP3O14638 875 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 TNPO2O14787 897 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 C8BP07358 591 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PRDX3P30048 256 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SLC7A1P30825 629 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 HOXC13P31276 330 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SLC5A2P31639 672 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PRKCQQ04759 706 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 KLHDC8BQ8IXV7 354 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ZNF786Q8N393 782 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 EFHD1Q9BUP0 239 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SOX17Q9H6I2 414 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 CD300AQ9UGN4 299 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 HTRA2O43464 458 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 CD1DP15813 335 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 GPX3P22352 226 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 HSPA13P48723 471 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 NR1H2P55055 460 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 HERVK_113P63132 956 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PLA2G4EQ3MJ16 856 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 LRRC23Q53EV4 343 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 RABL3Q5HYI8 236 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 GABPB2Q8TAK5 448 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ERVK-6Q9BXR3 956 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SARS2Q9NP81 518 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 POLR3BQ9NW08 1133 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 TMEM181Q9P2C4 612 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 USP22Q9UPT9 525 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 AZIN1O14977 448 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 SLC7A4O43246 635 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 RAMP2O60895 175 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 EEF1DP29692 281 aaKnown RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 OXTRP30559 389 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 CDKN1CP49918 316 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-203ENST00000409532 AGTR2P50052 363 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 NDST2P52849 883 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ZNF235Q14590 738 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 UGT3A2Q3SY77 523 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PAQR3Q6TCH7 311 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 PCYOX1LQ8NBM8 494 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ARRDC2Q8TBH0 407 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 NUDT8Q8WV74 236 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 RMDN1Q96DB5 314 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ACOX2Q99424 681 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 TUBB1Q9H4B7 451 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 VPS45Q9NRW7 570 aa11.23□□□□□ -0.61
ITGA6-203ENST00000409532 ZFC3H1O60293 1989 aaKnown RBP11.22□□□□□ -0.61
ITGA6-203ENST00000409532 A0A0D9SEW6 157 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 SCAMP3O14828 347 aaKnown RBP11.22□□□□□ -0.61
ITGA6-203ENST00000409532 INPP4BO15327 924 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 RHOBTB1O94844 696 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 TSNQ15631 228 aaKnown RBP11.22□□□□□ -0.61
ITGA6-203ENST00000409532 MAPRE1Q15691 268 aaKnown RBP11.22□□□□□ -0.61
ITGA6-203ENST00000409532 SLC15A3Q8IY34 581 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 OR2T34Q8NGX1 318 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 OR2T3Q8NH03 318 aa11.22□□□□□ -0.61
ITGA6-203ENST00000409532 CYGBQ8WWM9 190 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms