RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GALNT2Q10471 571 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 HNRNPDQ14103 355 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ZIK1Q3SY52 487 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 PIGGQ5H8A4 983 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 OGFRL1Q5TC84 451 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 GLT6D1Q7Z4J2 308 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 SCD5Q86SK9 330 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 STYXQ8WUJ0 223 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 CYGBQ8WWM9 190 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 COQ10BQ9H8M1 238 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ANKRD6Q9Y2G4 727 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 STX7O15400 261 aaKnown RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 MTX2O75431 263 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 HNRNPCP07910 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 PRDX6P30041 224 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 CYP2C18P33260 490 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RPL5P46777 297 aaKnown RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 C18orf21Q32NC0 220 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 FAM151BQ6UXP7 276 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RAB44Q7Z6P3 723 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 VTI1BQ9UEU0 232 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 COMMD3-BMI1R4GMX3 469 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 NIPSNAP2O75323 286 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RHOCP08134 193 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 GRIA3P42263 894 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 AGTR2P50052 363 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SLC7A2P52569 658 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 CDH15P55291 814 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 AP5B1Q2VPB7 878 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 KLHDC10Q6PID8 442 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 CUZD1Q86UP6 607 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RALGPS2Q86X27 583 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 HS6ST3Q8IZP7 471 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 HEATR9A2RTY3 570 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SDHDO14521 159 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SCAMP1O15126 338 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 TNFAIP8O95379 198 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 UGT1A1P22309 533 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 UGT1A4P22310 534 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 LRPAP1P30533 357 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 UGT1A3P35503 534 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 UGT1A5P35504 534 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 RENBPP51606 427 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SLC44A4Q53GD3 710 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 HECTD2Q5U5R9 776 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 KCTD11Q693B1 232 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 GRIN3AQ8TCU5 1115 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 ZFAND2BQ8WV99 257 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-204ENST00000409416 TNFRSF12AQ9NP84 129 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 GALNT8Q9NY28 637 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 ZNF711Q9Y462 761 aa13.38□□□□□ -0.27
COL6A2-204ENST00000409416 NPEPPSL1A6NEC2 478 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 K7ERQ8 282 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 SLC2A3P11169 496 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 PBLDP30039 288 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 GDF5P43026 501 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 CASP9P55211 416 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 C1QTNF8P60827 252 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 CDH18Q13634 790 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 ZFP1Q6P2D0 407 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 KDM1BQ8NB78 822 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 NCLNQ969V3 563 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 ZYG11BQ9C0D3 744 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 PNMA8BQ9ULN7 279 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TRIM17Q9Y577 477 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 CCDC162PA2VCL2 907 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TCAF2A6NFQ2 919 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TRIM38O00635 465 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 ANGPT2O15123 496 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 PABPC4LP0CB38 370 aaKnown RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 STX5Q13190 355 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 C1QTNF12Q5T7M4 302 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 AGAP9Q5VTM2 703 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 RNF219Q5W0B1 726 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 REP15Q6BDI9 236 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 DCLRE1AQ6PJP8 1040 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TMEM86AQ8N2M4 240 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 DGCR14Q96DF8 476 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms