RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PTPRNQ16849 979 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PGS1Q32NB8 556 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ATP6AP1LQ52LC2 224 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PIGGQ5H8A4 983 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 KCTD8Q6ZWB6 473 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 DET1Q7L5Y6 550 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 STRADAQ7RTN6 431 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 RSPH1Q8WYR4 309 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 RPL26L1Q9UNX3 145 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 GAS2O43903 313 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 OR1I1O60431 355 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SLC25A27O95847 323 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 RPL17P18621 184 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 CD247P20963 164 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HMGCS1Q01581 520 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 PATL1Q86TB9 770 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 SETD3Q86TU7 594 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ZC3H7AQ8IWR0 971 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 DHRSXQ8N5I4 330 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 KDM1BQ8NB78 822 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SPPL2BQ8TCT7 592 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 C16orf70Q9BSU1 422 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ADI1Q9BV57 179 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 RIBC2Q9H4K1 309 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 AGO3Q9H9G7 860 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 HCSTQ9UBK5 93 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 DAPK2Q9UIK4 370 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 POLR3HQ9Y535 204 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 ZNF638Q14966 1978 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SMIM31A0A1B0GVY4 71 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HACD1B0YJ81 288 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 FBP2O00757 339 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ANXA9O76027 345 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 GLP2RO95838 553 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 GOT2P00505 430 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 PABPC4LP0CB38 370 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 HSMCR30P0CW71 290 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 GLDCP23378 1020 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SERPINH1P50454 418 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 C21orf59P57076 290 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 DNASE1L3Q13609 305 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SPOUT1Q5T280 376 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 OGFRL1Q5TC84 451 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 ZNF772Q68DY9 489 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SZRD1Q7Z422 152 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ZNF410Q86VK4 478 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SLC44A2Q8IWA5 706 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 SIDT2Q8NBJ9 832 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 OR4K2Q8NGD2 314 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 NPLOC4Q8TAT6 608 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 RDH11Q8TC12 318 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HTRA1Q92743 480 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 PPP1R10Q96QC0 940 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 GPR21Q99679 349 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HGH1Q9BTY7 390 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 BBS2Q9BXC9 721 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 KLHL25Q9H0H3 589 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.32□□□□□ -1.082e-7■■□□□ 13.4
SNX13-201ENST00000409076 PKD2L2Q9NZM6 624 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 DMTF1Q9Y222 760 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 AAR2Q9Y312 384 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 TRIP12Q14669 1992 aaPredicted RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 CCDC154A6NI56 674 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ARVCFO00192 962 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 GPR182O15218 404 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 STRNO43815 780 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 KDM1AO60341 852 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 NTRK1P04629 796 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 FYNP06241 537 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SLC2A3P11169 496 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 TSHRP16473 764 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 CAPN3P20807 821 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HMOX2P30519 316 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 GKP32189 559 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 GEMP55040 296 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 RPL38P63173 70 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 LIPEQ05469 1076 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 AARS2Q5JTZ9 985 aaKnown RBP8.32□□□□□ -1.08
SNX13-201ENST00000409076 PGM2L1Q6PCE3 622 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 PAQR9Q6ZVX9 377 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 METTL6Q8TCB7 284 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ULK4Q96C45 1275 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 HSFY1Q96LI6 401 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 NPY6RQ99463 290 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 SACM1LQ9NTJ5 587 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 TBC1D23Q9NUY8 699 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 RIMS3Q9UJD0 308 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 ZNF112Q9UJU3 913 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 PCDHGA7Q9Y5G6 932 aa8.32□□□□□ -1.08
SNX13-201ENST00000409076 PTPRFP10586 1907 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 C5orf42Q9H799 3197 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 NME4O00746 187 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 SH3BP5O60239 455 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CNMDO75829 334 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms