RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 PIM3Q86V86 326 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ANKRD49Q8WVL7 239 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 LPGAT1Q92604 370 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ISG20Q96AZ6 181 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 ILKAPQ9H0C8 392 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 LINC00597Q9H2U6 94 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 DNAJC28Q9NX36 388 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 HS3ST2Q9Y278 367 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 CBX6O95503 412 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ALPIP09923 528 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 PABPC1P11940 636 aaKnown RBP18.93■□□□□ 0.62
USP39-202ENST00000409025 TYRP14679 529 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ALOX15P16050 662 aaPredicted RBP18.93■□□□□ 0.62
USP39-202ENST00000409025 SERPINA4P29622 427 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 TTPAP49638 278 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 STK19P49842 368 aaPredicted RBP18.93■□□□□ 0.62
USP39-202ENST00000409025 SUOXP51687 545 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ZRANB3Q5FWF4 1079 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 FAM91A1Q658Y4 838 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 TMEM207Q6UWW9 146 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 LYSMD3Q7Z3D4 306 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ZNF781Q8N8C0 355 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ING5Q8WYH8 240 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ZNF707Q96C28 371 aaPredicted RBP18.93■□□□□ 0.62
USP39-202ENST00000409025 OTUB2Q96DC9 234 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 CCDC126Q96EE4 140 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 SGF29Q96ES7 293 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ZSWIM3Q96MP5 696 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 EBF4Q9BQW3 602 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 NMUR2Q9GZQ4 415 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 CDH19Q9H159 772 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 PIDD1Q9HB75 910 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 ARHGEF3Q9NR81 526 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 IL17CQ9P0M4 197 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 TRIM33Q9UPN9 1127 aa18.93■□□□□ 0.62
USP39-202ENST00000409025 MRPS23Q9Y3D9 190 aaKnown RBP18.93■□□□□ 0.62
USP39-202ENST00000409025 SRP72O76094 671 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 CEBPBP17676 345 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 FMO4P31512 558 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 GKP32189 559 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 HMGCLP35914 325 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 DNAJB13P59910 316 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 PFKPQ01813 784 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 SULT2A1Q06520 285 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 PDAP1Q13442 181 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 KRT72Q14CN4 511 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 AARS2Q5JTZ9 985 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 CFAP157Q5JU67 520 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 FBXW10Q5XX13 1052 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 ASTLQ6HA08 431 aaPredicted RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 FAM109BQ6ICB4 259 aaPredicted RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 C22orf39Q6P5X5 142 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 INPP5DQ92835 1189 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 APOBEC2Q9Y235 224 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 RAP2CQ9Y3L5 183 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 A0A0J9YYE9 177 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 SLC9A3R1O14745 358 aaPredicted RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 RASSF9O75901 435 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 RHOBTB1O94844 696 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 TRBC1P01850 177 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 ERVK-21P61565 698 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 KCNJ2P63252 427 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 TIAL1Q01085 375 aaKnown RBP eCLIP18.92■□□□□ 0.62
USP39-202ENST00000409025 PEX6Q13608 980 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 DMC1Q14565 340 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 LY6G5CQ5SRR4 150 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 C9orf50Q5SZB4 431 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 PSAPL1Q6NUJ1 521 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 KIF2BQ8N4N8 673 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.92■□□□□ 0.62
USP39-202ENST00000409025 TXNDC5Q8NBS9 432 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 PRR11Q96HE9 360 aaPredicted RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 NSL1Q96IY1 281 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 CEP44Q9C0F1 390 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 LRMDAQ9H2I8 198 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 POMKQ9H5K3 350 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 MYOFQ9NZM1 2061 aa18.92■□□□□ 0.62
USP39-202ENST00000409025 FNDC3AQ9Y2H6 1198 aaKnown RBP18.92■□□□□ 0.62
USP39-202ENST00000409025 SERPINA6P08185 405 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 TFEBP19484 476 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 CDKN1CP49918 316 aaPredicted RBP18.91■□□□□ 0.62
USP39-202ENST00000409025 HK2P52789 917 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 PRKAA1Q13131 559 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 MYLK3Q32MK0 819 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 ACCSLQ4AC99 568 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 MAVSQ7Z434 540 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 TTC7BQ86TV6 843 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 TUBGCP5Q96RT8 1024 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 TLE6Q9H808 572 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 ZFYVE1Q9HBF4 777 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 SYTL2Q9HCH5 934 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 ARL8BQ9NVJ2 186 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 TAS2R13Q9NYV9 303 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 NCKIPSDQ9NZQ3 722 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 WNT6Q9Y6F9 365 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 SLC30A1Q9Y6M5 507 aa18.91■□□□□ 0.62
USP39-202ENST00000409025 A0A0U1RQS6 177 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 F8W8V4 182 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ZNF195O14628 629 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms