RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SERHL2Q9H4I8 314 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ELP3Q9H9T3 547 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RRAGCQ9HB90 399 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SYTL2Q9HCH5 934 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ABCB9Q9NP78 766 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SERHLQ9NQF3 203 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 POLE3Q9NRF9 147 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 OLA1Q9NTK5 396 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ZDHHC7Q9NXF8 308 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MAT2BQ9NZL9 334 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SPO11Q9Y5K1 396 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ASTN1O14525 1302 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 G3V2T6 193 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 GNB5O14775 395 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 AXIN1O15169 862 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RGS10O43665 173 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CNPP09543 421 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PRKAR1AP10644 381 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ITGB5P18084 799 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MATN1P21941 496 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 AKT1P31749 480 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 OPRL1P41146 370 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SLC26A2P50443 739 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PRKCQQ04759 706 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 GK3PQ14409 553 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TMEM198Q66K66 360 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 C11orf88Q6PI97 169 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 C17orf99Q6UX52 265 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TMPRSS11AQ6ZMR5 421 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 DCP2Q8IU60 420 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 FAM71AQ8IYT1 594 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 COLGALT1Q8NBJ5 622 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ABHD11Q8NFV4 315 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ATL1Q8WXF7 558 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CCDC120Q96HB5 630 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MED30Q96HR3 178 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TRNT1Q96Q11 434 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 UQCC2Q9BRT2 126 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MLPHQ9BV36 600 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RPF1Q9H9Y2 349 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CCNB1IP1Q9NPC3 277 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 POLIQ9UNA4 740 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SNX7Q9UNH6 387 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CPQQ9Y646 472 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 H0YJX3 145 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 H3BMQ9 156 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PMM2O15305 246 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 NUAK1O60285 661 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PLIN3O60664 434 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RNASEH2AO75792 299 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 KLHL18O94889 574 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CCNYL3P0C7X3 344 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 FOSL1P15407 271 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 GTF2E2P29084 291 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RPL35P42766 123 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RPL7AP62424 266 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PMS2P3Q13401 168 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MAMLD1Q13495 774 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 HNRNPDQ14103 355 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MED22Q15528 200 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PCSK7Q16549 785 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SMUG1Q53HV7 270 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PPM1JQ5JR12 505 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TPRG1LQ5T0D9 272 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RBM20Q5T481 1227 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RGMBQ6NW40 437 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CNSTQ6PJW8 725 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 DPY19L3Q6ZPD9 716 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RFPL4BQ6ZWI9 263 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CATSPER4Q7RTX7 472 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MPP5Q8N3R9 675 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 UBA3Q8TBC4 463 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 URGCPQ8TCY9 931 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 DENND1AQ8TEH3 1009 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CHPT1Q8WUD6 406 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF606Q8WXB4 792 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 HDAC10Q969S8 669 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 C19orf60Q96EN9 201 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF668Q96K58 619 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 COG8Q96MW5 612 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RMDN3Q96TC7 470 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CPNE1Q99829 537 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 EBNA1BP2Q99848 306 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 MKRN2Q9H000 416 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 DCSTAMPQ9H295 470 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 STARD7Q9NQZ5 370 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 NRBP2Q9NSY0 501 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CPSF3Q9UKF6 684 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 NOX1Q9Y5S8 564 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-203ENST00000406072 H3BMM5 538 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 CHADO15335 359 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 CYP2C8P10632 490 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 CD36P16671 472 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 TPH1P17752 444 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 TSPAN8P19075 237 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 UQCRC1P31930 480 aa5.85□□□□□ -1.47
HDAC9-203ENST00000406072 GDI2P50395 445 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms