RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HACE1Q8IYU2 909 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ARFGAP1Q8N6T3 406 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 RASSF8Q8NHQ8 419 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ATOH1Q92858 354 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF622Q969S3 477 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 VPS33AQ96AX1 596 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZBTB9Q96C00 473 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 RMDN1Q96DB5 314 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLITRK1Q96PX8 696 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SIN3AQ96ST3 1273 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 PAFAH2Q99487 392 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 MXRA8Q9BRK3 442 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 C1QTNF1Q9BXJ1 281 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SELENONQ9NZV5 590 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SEL1LQ9UBV2 794 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 NAP1L2Q9ULW6 460 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 CMAHPQ9Y471 501 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 A0A096LPK6 155 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 TCRBV21S2A2A0A5A6 115 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ATG13O75143 517 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 GGPS1O95749 300 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ABCB1P08183 1280 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC16A2P36021 539 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 MSH2P43246 934 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 RBP5P82980 135 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 TFAP4Q01664 338 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 PPARDQ03181 441 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ALCAMQ13740 583 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 NAB2Q15742 525 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 MIDNQ504T8 468 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLEKHO1Q53GL0 409 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 DCLRE1AQ6PJP8 1040 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 LCTLQ6UWM7 567 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 AACSQ86V21 672 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 CEP97Q8IW35 865 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 THNSL1Q8IYQ7 743 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 MMP21Q8N119 569 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZCCHC9Q8N567 271 aaKnown RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 APPL2Q8NEU8 664 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 GJC3Q8NFK1 279 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 GSDMBQ8TAX9 411 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 PTPMT1Q8WUK0 201 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 RNF183Q96D59 192 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC41A2Q96JW4 573 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 CEP295NLQ96MC4 621 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 FAM110AQ9BQ89 295 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 TRMOQ9BU70 441 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 DENND2DQ9H6A0 471 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 MAGEE1Q9HCI5 957 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ABCF3Q9NUQ8 709 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 TMEM45AQ9NWC5 275 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ARHGEF38Q9NXL2 777 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 PSD3Q9NYI0 1048 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 NDRG3Q9UGV2 375 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 IPO11Q9UI26 975 aaKnown RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 AGO2Q9UKV8 859 aaKnown RBP5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLAGL1Q9UM63 463 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 CEPT1Q9Y6K0 416 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 A3GALT2U3KPV4 340 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 ARHGEF40Q8TER5 1519 aa5.02□□□□□ -1.61
HMGB1P13-201ENST00000406019 RPGRIP1LQ68CZ1 1315 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 URADA6NGE7 173 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 H0Y626 953 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 AVILO75366 819 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 DAB1O75553 588 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 C22orf31O95567 290 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ACTN1P12814 892 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CPT2P23786 658 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 SUOXP51687 545 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CXCL9Q07325 125 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PMPCAQ10713 525 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 BFSP1Q12934 665 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 COG2Q14746 738 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CDC37Q16543 378 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 RARS2Q5T160 578 aaKnown RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 DAB2IPQ5VWQ8 1189 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ISM2Q6H9L7 571 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLEKHA7Q6IQ23 1121 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZNF793Q6ZN11 406 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CHST3Q7LGC8 479 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 DNAJB7Q7Z6W7 309 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 SNX32Q86XE0 403 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 LURAP1LQ8IV03 231 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC35F3Q8IY50 421 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 OR8H3Q8N146 312 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZBTB8BQ8NAP8 495 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CMASQ8NFW8 434 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 HUS1BQ8NHY5 278 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 FBXL8Q96CD0 374 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 JAKMIP1Q96N16 626 aaKnown RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 CAMK1GQ96NX5 476 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 TMEM47Q9BQJ4 181 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 SYT17Q9BSW7 474 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ANP32EQ9BTT0 268 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 IFIH1Q9BYX4 1025 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms