RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CHP1Q99653 195 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
PRAME-204ENST00000403441 AP4E1Q9UPM8 1137 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 PTPN13Q12923 2485 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 C9orf172C9J069 976 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 DFFAO00273 331 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 RNF8O76064 485 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 MYCLP1P12525 358 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 FECHP22830 423 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 NFKBIAP25963 317 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 IL1R2P27930 398 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 ETV5P41161 510 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 HCAR3P49019 387 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 ZNF135P52742 658 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 SLC25A11Q02978 314 aaKnown RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 NSUN2Q08J23 767 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRAME-204ENST00000403441 PEX6Q13608 980 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 DPYSL2Q16555 572 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 TBR1Q16650 682 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 CLPPQ16740 277 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 AFMIDQ63HM1 303 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 PNCKQ6P2M8 343 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 TMPRSS9Q7Z410 1059 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 SFTPA2Q8IWL1 248 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 CCDC112Q8NEF3 446 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 FAM71BQ8TC56 605 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 NUS1Q96E22 293 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 LGR4Q9BXB1 951 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 GSDMCQ9BYG8 508 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 SLC39A8Q9C0K1 460 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 SEMA6CQ9H3T2 930 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 DHX35Q9H5Z1 703 aaKnown RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 SUDS3Q9H7L9 328 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 CARS2Q9HA77 564 aaKnown RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 RDH14Q9HBH5 336 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 PHPT1Q9NRX4 125 aaPredicted RBP12.35□□□□□ -0.43
PRAME-204ENST00000403441 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 KCTD5Q9NXV2 234 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 MYO1AQ9UBC5 1043 aa12.35□□□□□ -0.43
PRAME-204ENST00000403441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 A8MX80 341 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 MTA2O94776 668 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 TMEM253P0C7T8 217 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 CCNB1P14635 433 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 TCF4P15884 667 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 SCNN1BP51168 640 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 RENBPP51606 427 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 NFKB2Q00653 900 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 B4GALNT1Q00973 533 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 C16orf72Q14CZ0 275 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 RFX8Q6ZV50 586 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 ZNF438Q7Z4V0 828 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 HEATR4Q86WZ0 1026 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 CCL4L1Q8NHW4 92 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 ZDHHC1Q8WTX9 485 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 TEKT4Q8WW24 435 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 KCTD15Q96SI1 283 aaPredicted RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 PACSIN1Q9BY11 444 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 NHEJ1Q9H9Q4 299 aaPredicted RBP12.34□□□□□ -0.43
PRAME-204ENST00000403441 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 B4GALT6Q9UBX8 382 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
PRAME-204ENST00000403441 A0A1W2PQ67 120 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 SUV39H1O43463 412 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 LCA5LO95447 670 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 TPM1P09493 284 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 ITGB6P18564 788 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 GPR3P46089 330 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 GNPDA1P46926 289 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 ZNF75DP51815 510 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 OR1D5P58170 312 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 CYP4F2P78329 520 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 IL10RBQ08334 325 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 DPYSQ14117 519 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 ZNF235Q14590 738 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.44
PRAME-204ENST00000403441 TMCO4Q5TGY1 634 aa12.33□□□□□ -0.44
PRAME-204ENST00000403441 PDCD6IPQ8WUM4 868 aaKnown RBP12.33□□□□□ -0.44
PRAME-204ENST00000403441 CCDC74BQ96LY2 380 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms