RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FAM45AQ8TCE6 357 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 SCG3Q8WXD2 468 aaKnown RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 THOC1Q96FV9 657 aaKnown RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 GPR78Q96P69 363 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 ECT2Q9H8V3 914 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 ZFYVE1Q9HBF4 777 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 CLEC1BQ9P126 229 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 CORO1CQ9ULV4 474 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 RUVBL2Q9Y230 463 aaKnown RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 PKP3Q9Y446 797 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 C1orf232A0A0U1RR37 186 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 G3V2L1 256 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 PMLP29590 882 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 RAD51Q06609 339 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ILF2Q12905 390 aaKnown RBP25.59■■□□□ 1.69
CPNE1-205ENST00000401607 IFT88Q13099 833 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ATG16L1Q676U5 607 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ZCCHC23Q6ZST2 131 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 PIANPQ8IYJ0 282 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 NXNL1Q96CM4 212 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 TSPAN17Q96FV3 270 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ZNF641Q96N77 438 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-205ENST00000401607 LYSMD1Q96S90 227 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ZFP14Q9HCL3 533 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 PPIL1Q9Y3C6 166 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 SCN8AQ9UQD0 1980 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 KLHL2O95198 593 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ASLP04424 464 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 UGT2B4P06133 528 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 DLDP09622 509 aaKnown RBP25.59■■□□□ 1.69
CPNE1-205ENST00000401607 SBK3P0C264 359 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 CPA3P15088 417 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 HOXB8P17481 243 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-205ENST00000401607 PDGFRLQ15198 375 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 LPGAT1Q92604 370 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 TSNARE1Q96NA8 513 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 MYADMQ96S97 322 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 TCF12Q99081 682 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 FAM96AQ9H5X1 160 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 THG1LQ9NWX6 298 aaKnown RBP25.59■■□□□ 1.69
CPNE1-205ENST00000401607 ARL2BPQ9Y2Y0 163 aa25.59■■□□□ 1.69
CPNE1-205ENST00000401607 PRRC2BQ5JSZ5 2229 aaKnown RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 NPIPB15A6NHN6 443 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 SNNO75324 88 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 CLDN7O95471 211 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 SRPRAP08240 638 aaKnown RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 FDXRP22570 491 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 TIAL1Q01085 375 aaKnown RBP eCLIP25.58■■□□□ 1.692e-6■■■■■ 33.5
CPNE1-205ENST00000401607 FCHO2Q0JRZ9 810 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 OVGP1Q12889 678 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 LRRC8EQ6NSJ5 796 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 SPATA6LQ8N4H0 392 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 S1PR5Q9H228 398 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 IGSF5Q9NSI5 407 aa25.58■■□□□ 1.69
CPNE1-205ENST00000401607 FNDC3AQ9Y2H6 1198 aaKnown RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 MTF2Q9Y483 593 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-205ENST00000401607 TK2O00142 265 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 ATP5BP06576 529 aaKnown RBP25.57■■□□□ 1.68
CPNE1-205ENST00000401607 NNMTP40261 264 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 RECQLP46063 649 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-205ENST00000401607 GLRBP48167 497 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 OCRLQ01968 901 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 TSPAN33Q86UF1 283 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 NXPE3Q969Y0 559 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 SCRN2Q96FV2 425 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 C7orf26Q96N11 449 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 C19orf43Q9BQ61 176 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 AARSD1Q9BTE6 412 aaKnown RBP25.57■■□□□ 1.68
CPNE1-205ENST00000401607 PLA2G2FQ9BZM2 168 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 MTG2Q9H4K7 406 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 ZNF395Q9H8N7 513 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-205ENST00000401607 KLHL14Q9P2G3 628 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 WASF2Q9Y6W5 498 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 DOCK8Q8NF50 2099 aa25.57■■□□□ 1.68
CPNE1-205ENST00000401607 PRRT4C9JH25 899 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 APOA4P06727 396 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 DLX2Q07687 328 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 STX3Q13277 289 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TSNAXIP1Q2TAA8 658 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 ZRANB3Q5FWF4 1079 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 ATAT1Q5SQI0 421 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TMEM207Q6UWW9 146 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 GDPD4Q6W3E5 623 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TBC1D1Q86TI0 1168 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 PIM3Q86V86 326 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 FSTL5Q8N475 847 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TTC8Q8TAM2 541 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 GRIN3AQ8TCU5 1115 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 MCCC1Q96RQ3 725 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 HEPHQ9BQS7 1158 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 C20orf27Q9GZN8 174 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 GPAMQ9HCL2 828 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 ELOVL2Q9NXB9 296 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 CPSF2Q9P2I0 782 aaKnown RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 ZNF106Q9H2Y7 1883 aaKnown RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TARM1B6A8C7 271 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 GAPDHSO14556 408 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 GPR39O43194 453 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 TBX10O75333 385 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 SEMG2Q02383 582 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms