RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 ZNF558Q96NG5 402 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 CAPN8A6NHC0 703 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 PGM3O95394 542 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 GRIA3P42263 894 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 TSNQ15631 228 aaKnown RBP13.5□□□□□ -0.25
SIRPA-203ENST00000400068 TAZQ16635 292 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 SCD5Q86SK9 330 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 STAG3L4Q8TBR4 150 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 ECSITQ9BQ95 431 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 TBCDQ9BTW9 1192 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■■■■ 51.9
SIRPA-203ENST00000400068 ACTR8Q9H981 624 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 BLOC1S6Q9UL45 172 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 FOCADQ5VW36 1801 aa13.5□□□□□ -0.25
SIRPA-203ENST00000400068 MAGEA13PA6NCF6 341 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SORBS2O94875 1100 aaKnown RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 EOMESO95936 686 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 FGF1P05230 155 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 LPOP22079 712 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 ARPC4P59998 168 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 DYNC1I2Q13409 638 aaKnown RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SYTL3Q4VX76 610 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 FAM45BPQ6NSW5 357 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 FAM45AQ8TCE6 357 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF483Q8TF39 744 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SMIM14Q96QK8 99 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 MRPL40Q9NQ50 206 aaKnown RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 VPS45Q9NRW7 570 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 RIC8BQ9NVN3 520 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 GID8Q9NWU2 228 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 PNMA8BQ9ULN7 279 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 PPM1HQ9ULR3 514 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 NDUFAF1Q9Y375 327 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 GREB1LQ9C091 1923 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 GLDCP23378 1020 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SLC7A2P52569 658 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 INPP5AQ14642 412 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 TCEA2Q15560 299 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 CLEC4FQ8N1N0 589 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 OR9I1Q8NGQ6 314 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 RTP4Q96DX8 246 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF212Q9UDV6 495 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 CNTRLQ7Z7A1 2325 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 IQCF5A8MTL0 148 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 HAS3O00219 553 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 MAFKO60675 156 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 GKP32189 559 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 CYP4F8P98187 520 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 DHDDSQ86SQ9 333 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.49□□□□□ -0.25
SIRPA-203ENST00000400068 OXSMQ9NWU1 459 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 PKD2L2Q9NZM6 624 aa13.49□□□□□ -0.25
SIRPA-203ENST00000400068 CLASP2O75122 1294 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 NDST3O95803 873 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 HLA-DPA1P20036 260 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 HCAR3P49019 387 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ARSDP51689 593 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 CCNG1P51959 295 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ZBTB49Q6ZSB9 765 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 SIKE1Q9BRV8 207 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 MRPL17Q9NRX2 175 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 LTBP1Q14766 1721 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 NIPSNAP2O75323 286 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 MAP4P27816 1152 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 PEX2P28328 305 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ATP6AP1LQ52LC2 224 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 AARS2Q5JTZ9 985 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 CLLU1OSQ5K130 101 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 PAOXQ6QHF9 649 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 LRRC49Q8IUZ0 686 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 UTP4Q969X6 686 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 FBRSL1Q9HCM7 1045 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 CFAP97Q9P2B7 532 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 DOCK1Q14185 1865 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ESRRBO95718 433 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ALPIP09923 528 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF23P17027 643 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms